calponin 3, acidic

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Synonym

Calponin, acidic isoform, 1600014M03Rik, C85854, Cnn3, calponin 3, acidic, Calponin-3

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:198 cerebellum:350 brain stem:317.80 corpus callosum/glia:- pineal gland:515.60 peripheral nerve:535 spine:189.10 retina:771.50 eye:296.30 artery/aorta:84.40 vein:- lymphnode:- peripheral blood:14.40 spleen:26.30 thymus:335.90 bone marrow:12.80 adipose:212.70 bone:288.10 skin:364.20
GeneChip cerebrum:8.87 cerebellum:8.94 brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:11.10 spine:9.74 retina:11.06 eye:11.86 artery/aorta:- vein:11.92 lymphnode:9.64 peripheral blood:- spleen:9.19 thymus:- bone marrow:8.11 adipose:8.80 bone:9.22 skin:10.10
CAGE cerebrum:3.95 cerebellum:- brain stem:4.03 corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:4.54 retina:- eye:- artery/aorta:4.42 vein:- lymphnode:4.08 peripheral blood:- spleen:3.16 thymus:4.49 bone marrow:- adipose:- bone:3.44 skin:4.27
RNA-seq cerebrum:17.75 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:1265.10 placenta:331.40 prostate:123.50 ovary:275.80 testis:170 heart:241.80 muscle:177.50 esophagus:- stomach:425.50 intestine:- colon:141     liver/hepato:117.70        lung:210.90    bladder:860.40 kidney:257.90 pituitary:594.20 thyroid/parathyroid:- adrenal gland:424.40 pancreas:37.50 breast:153.40 salivary:-
GeneChip uterus:10.55 placenta:10.41 prostate:9.86 ovary:11.15 testis:5.84 heart:9 muscle:8.60 esophagus:- stomach:10.43 intestine:8.89 colon:- liver/hepato:9.41 lung:10.57 bladder:11.45 kidney:9.92 pituitary:9.94 thyroid/parathyroid:- adrenal gland:11.14 pancreas:7.23 breast:9.85 salivary:10.07
CAGE uterus:4.47 placenta:5.00 prostate:4.79 ovary:4.93 testis:2.19 heart:- muscle:- esophagus:- stomach:4.94 intestine:3.57 colon:3.97     liver/hepato:4.88    lung:4.56 bladder:4.93 kidney:- pituitary:4.08 thyroid/parathyroid:- adrenal gland:4.74 pancreas:3.68 breast:3.70 salivary:-
RNA-seq uterus:- placenta:- prostate:- ovary:- testis:- heart:- muscle:7.77 esophagus:- stomach:- intestine:- colon:-     liver/hepato:18.73        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-

Gene Information

IDs

Refseq ID NM_028044
Gene ID 71994
Unigene ID Mm.275555
Probe set ID 1455570_x_at  [Mouse430_2]
Ensembl ID ENSMUSG00000053931

Orthologous Gene

Human[1]  NM_001839
Rat[1]  NM_001839

Chromosomal Region

-

Gene Family (Interpro ID)

IPR001997  Calponin
IPR016146  Calponin-homology
IPR001715  Calponin-like actin-binding
IPR003096  SM22/calponin

Link to Pubmed  (Pubmed ID)

8889548
10349636
10512203
10725249
10922068
11042159
11076861
11217851
11591653
12466851
12477932
12520002
14610273
15489334
15618518
15782199
15840001
16107646
16141072
16141073
16458080
17332066
17967808
18287559
18799693
20181831
20534673
20861310
21267068
21327095
22083510
22922362
23276748
24457600

Gene Ontology  (GO ID)

Biological Process

GO:0031032  actomyosin structure organization
GO:0032780  negative regulation of ATPase activity

Cellular Component

GO:0043025  cell soma
GO:0030425  dendrite
GO:0043197  dendritic spine
GO:0014069  postsynaptic density

Molecular Function

GO:0003779  actin binding
GO:0005516  calmodulin binding
GO:0008017  microtubule binding
GO:0005515  protein binding