AT rich interactive domain 1A (SWI-like)

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Synonym

Arid1a, Smarcf1, Osa1, AT rich interactive domain 1A (Swi1 like), 1110030E03Rik

normal 40 tissues
developmental tissues and primary cells（FANTOM5 CAGE）

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain

blood

connective

EST

cerebrum:116.40

cerebellum:36.80

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:19.10

spine:-

retina:96.40

eye:235.50

artery/aorta:168.80

vein:-

lymphnode:32.40

peripheral blood:129.40

spleen:92.20

thymus:98.80

bone marrow:12.80

adipose:-

bone:100.20

skin:71.30

GeneChip

cerebrum:8.43

cerebellum:8.26

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:7.65

spine:8.14

retina:6.52

eye:6.14

artery/aorta:-

vein:7.74

lymphnode:10.06

peripheral blood:-

spleen:10.08

thymus:-

bone marrow:9.52

adipose:7.94

bone:8.41

skin:7.65

CAGE

cerebrum:4.19

cerebellum:-

brain stem:3.81

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:3.83

retina:-

eye:-

artery/aorta:3.68

vein:-

lymphnode:4.33

peripheral blood:-

spleen:4.43

thymus:5.01

bone marrow:-

adipose:-

bone:4.18

skin:4.34

RNA-seq

cerebrum:7.82

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:-

retina:-

eye:-

artery/aorta:-

vein:-

lymphnode:-

peripheral blood:-

spleen:-

thymus:-

bone marrow:-

adipose:-

bone:-

skin:-

reproductive

muscular

alimentary

liver

lung

urinary

endo/exo-crine

EST

uterus:87.20

placenta:13.80

prostate:-

ovary:551.60

testis:59.10

heart:-

muscle:-

esophagus:-

stomach:-

intestine:-

colon:52.90

liver/hepato:-

lung:60.30

bladder:-

kidney:40.30

pituitary:-

thyroid/parathyroid:112.50

adrenal gland:-

pancreas:65.70

breast:94.70

salivary:108

GeneChip

uterus:8.96

placenta:7.96

prostate:8.61

ovary:8.68

testis:8.52

heart:7.68

muscle:7.79

esophagus:-

stomach:8.22

intestine:8.43

colon:-

liver/hepato:7.29

lung:8.62

bladder:8.08

kidney:8.06

pituitary:8.35

thyroid/parathyroid:-

adrenal gland:8.09

pancreas:8.22

breast:8.27

salivary:8.02

CAGE

uterus:4.16

placenta:3.82

prostate:3.67

ovary:4.20

testis:3.57

heart:-

muscle:-

esophagus:-

stomach:4.00

intestine:4.10

colon:3.93

liver/hepato:3.61

lung:4.38

bladder:4.08

kidney:-

pituitary:4.06

thyroid/parathyroid:-

adrenal gland:3.89

pancreas:4.21

breast:4.00

salivary:-

RNA-seq

uterus:-

placenta:-

prostate:-

ovary:-

testis:-

heart:-

muscle:1.81

esophagus:-

stomach:-

intestine:-

colon:-

liver/hepato:2.54

lung:-

bladder:-

kidney:-

pituitary:-

thyroid/parathyroid:-

adrenal gland:-

pancreas:-

breast:-

salivary:-

IDs

Refseq ID	NM_001080819
Gene ID	93760
Unigene ID	Mm.22478
Probe set ID	1417440_at [Mouse430_2]
Ensembl ID	ENSMUSG00000007880

Orthologous Gene

Human[6]	NM_006015, NM_139135
Rat [0]

Chromosomal Region

Gene Family (Interpro ID)

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

GO:0030521	androgen receptor signaling pathway
GO:0043044	ATP-dependent chromatin remodeling
GO:0003205	cardiac chamber development
GO:0016568	chromatin modification
GO:0006325	chromatin organization
GO:0006338	chromatin remodeling
GO:0030520	estrogen receptor signaling pathway
GO:0030900	forebrain development
GO:0042921	glucocorticoid receptor signaling pathway
GO:0000122	negative regulation of transcription from RNA polymerase II promoter
GO:0007399	nervous system development
GO:0001843	neural tube closure
GO:0006337	nucleosome disassembly
GO:0003408	optic cup formation involved in camera-type eye development
GO:0060674	placenta blood vessel development
GO:0045893	positive regulation of transcription, DNA-dependent
GO:0006355	regulation of transcription, DNA-dependent
GO:0006351	transcription, DNA-dependent

Cellular Component

GO:0005622	intracellular
GO:0000790	nuclear chromatin
GO:0005634	nucleus
GO:0016514	SWI/SNF complex

Molecular Function

GO:0003677	DNA binding
GO:0016922	ligand-dependent nuclear receptor binding
GO:0031491	nucleosome binding
GO:0005515	protein binding

AT rich interactive domain 1A (SWI-like)

Synonym

Expression Pattern

Choropleth map on BodyParts3D

Classification in 40 Organs

Gene Information

IDs

Orthologous Gene

Chromosomal Region

Gene Family (Interpro ID)

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

Cellular Component

Molecular Function