DEP domain containing 6

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Synonym

Depdc6, DEP domain containing 6, KIAA4200, D15Ertd336e, 4731402B04Rik, D15Ertd597e, R75183, 9130412E02Rik, mKIAA4200

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:8.70 cerebellum:- brain stem:63.60 corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:7.60 artery/aorta:84.40 vein:- lymphnode:- peripheral blood:14.40 spleen:118.50 thymus:- bone marrow:- adipose:- bone:- skin:7.90
GeneChip cerebrum:6.23 cerebellum:5.20 brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:8.94 spine:6.38 retina:4.90 eye:4.68 artery/aorta:- vein:5.19 lymphnode:6.91 peripheral blood:- spleen:5.54 thymus:- bone marrow:5.57 adipose:9.25 bone:5.55 skin:7.04
CAGE cerebrum:1.90 cerebellum:- brain stem:2.57 corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:2.61 retina:- eye:- artery/aorta:4.18 vein:- lymphnode:2.71 peripheral blood:- spleen:1.22 thymus:1.06 bone marrow:- adipose:- bone:2.09 skin:3.63
RNA-seq cerebrum:1.31 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:13.80 prostate:- ovary:23 testis:- heart:- muscle:142 esophagus:- stomach:- intestine:- colon:-     liver/hepato:45.30        lung:10    bladder:132.40 kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:120.80 salivary:162
GeneChip uterus:7.48 placenta:5.10 prostate:8.91 ovary:7.85 testis:4.34 heart:6.05 muscle:9.92 esophagus:- stomach:9.16 intestine:8.90 colon:- liver/hepato:10.22 lung:7.91 bladder:9.38 kidney:8.23 pituitary:6.55 thyroid/parathyroid:- adrenal gland:8.85 pancreas:9.56 breast:9.54 salivary:9.35
CAGE uterus:2.90 placenta:0.56 prostate:3.35 ovary:3.10 testis:0.75 heart:- muscle:- esophagus:- stomach:3.21 intestine:2.45 colon:3.09     liver/hepato:4.27    lung:2.91 bladder:3.63 kidney:- pituitary:2.66 thyroid/parathyroid:- adrenal gland:3.11 pancreas:4.61 breast:4.69 salivary:-
RNA-seq uterus:- placenta:- prostate:- ovary:- testis:- heart:- muscle:1.97 esophagus:- stomach:- intestine:- colon:-     liver/hepato:7.49        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-

Gene Information

IDs

Refseq ID NM_001037937
Gene ID 97998
Unigene ID Mm.393497
Probe set ID 1451348_at  [Mouse430_2]
Ensembl ID ENSMUSG00000022419

Orthologous Gene

Human[1]  NM_022783
Rat[1]  NM_022783

Chromosomal Region

-

Gene Family (Interpro ID)

IPR000591  DEP domain
IPR011991  Winged helix repressor DNA-binding

Link to Pubmed  (Pubmed ID)

10349636
10512203
10725249
11042159
11076861
11217851
11285235
12466851
12477932
12520002
14610273
15782199
15840001
16141072
16141073
17015433
17967808
18799693
21267068
21607293
21677750
22883231
23563706

Gene Ontology  (GO ID)

Biological Process

GO:0045792  negative regulation of cell size
GO:0006469  negative regulation of protein kinase activity
GO:0032007  negative regulation of TOR signaling pathway

Cellular Component

GO:0005622  intracellular