snail homolog 1 (Drosophila)

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Synonym

-

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:- cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:78 thymus:- bone marrow:- adipose:- bone:117.10 skin:-
GeneChip nodata
CAGE nodata
RNA-seq nodata
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:79.60 prostate:- ovary:- testis:164.70 heart:58.20 muscle:- esophagus:- stomach:- intestine:- colon:-     liver/hepato:-        lung:-    bladder:- kidney:63.80 pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:56.90 breast:- salivary:-
GeneChip nodata
CAGE nodata
RNA-seq nodata

Gene Information

IDs

Refseq ID NM_053805
Gene ID 116490
Unigene ID Rn.8008
Probe set ID -
Ensembl ID ENSRNOG00000009594

Orthologous Gene

Human[1]  NM_005985
Mouse[1]  NM_011427

Chromosomal Region

3q42  [158,676,980  -  158,681,466]

Gene Family (Interpro ID)

IPR015880  Zinc finger, C2H2-like
IPR007087  Zinc finger, C2H2-type
IPR003604  Zinc finger, U1-type

Link to Pubmed  (Pubmed ID)

1302246
12477932
15155580
17692821
20930141
23460471
23707238
23831330
24379627

Gene Ontology  (GO ID)

Biological Process

GO:0060536  cartilage morphogenesis
GO:0016477  cell migration
GO:0001837  epithelial to mesenchymal transition
GO:0003198  epithelial to mesenchymal transition involved in endocardial cushion formation
GO:0031069  hair follicle morphogenesis
GO:0060972  left/right pattern formation
GO:0007498  mesoderm development
GO:0001707  mesoderm formation
GO:0043066  negative regulation of apoptosis
GO:0045786  negative regulation of cell cycle
GO:0060806  negative regulation of cell differentiation involved in embryonic placenta development
GO:0043518  negative regulation of DNA damage response, signal transduction by p53 class mediator
GO:0000122  negative regulation of transcription from RNA polymerase II promoter
GO:0045892  negative regulation of transcription, DNA-dependent
GO:0010957  negative regulation of vitamin D biosynthetic process
GO:0001649  osteoblast differentiation
GO:0060021  palate development
GO:0030335  positive regulation of cell migration
GO:0010718  positive regulation of epithelial to mesenchymal transition
GO:0045893  positive regulation of transcription, DNA-dependent
GO:0006357  regulation of transcription from RNA polymerase II promoter
GO:0060707  trophoblast giant cell differentiation

Cellular Component

GO:0005737  cytoplasm
GO:0005634  nucleus

Molecular Function

GO:0019900  kinase binding
GO:0043565  sequence-specific DNA binding
GO:0008270  zinc ion binding