protocadherin alpha 4

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Synonym

-

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:143.60 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:258.10 spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:39 skin:-
GeneChip nodata
CAGE nodata
RNA-seq nodata
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:- prostate:- ovary:114.10 testis:- heart:- muscle:- esophagus:- stomach:- intestine:- colon:-     liver/hepato:-        lung:101.30    bladder:- kidney:63.80 pituitary:59.20 thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-
GeneChip nodata
CAGE nodata
RNA-seq nodata

Gene Information

IDs

Refseq ID NM_053933
Gene ID 116741
Unigene ID Rn.22308
Probe set ID -
Ensembl ID ENSRNOG00000020119

Orthologous Gene

Human[2]  NM_018899, NM_031883
Mouse[21]  NM_001003671, NM_001003672, NM_007766, NM_009960, NM_009961, NM_054072, NM_138661, NM_138663, NM_198117

Chromosomal Region

18p11  [29,661,520  -  29,928,031]

Gene Family (Interpro ID)

IPR002126  Cadherin
IPR015919  Cadherin-like
IPR006644  Dystroglycan-type cadherin-like

Link to Pubmed  (Pubmed ID)

10650949
12477932
12508039
14522826
14672974
15028293
15489334
15744052
17110050

Gene Ontology  (GO ID)

Biological Process

GO:0007156  homophilic cell adhesion
GO:0042476  odontogenesis

Cellular Component

GO:0005783  endoplasmic reticulum
GO:0016021  integral to membrane
GO:0016020  membrane
GO:0005886  plasma membrane
GO:0045202  synapse

Molecular Function

GO:0005509  calcium ion binding