PRP19/PSO4 pre-mRNA processing factor 19 homolog (S. cerevisiae)

 jump to detail

Synonym

-

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:107.70 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:258.10 spine:- retina:- eye:142.20 artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:234 thymus:245.80 bone marrow:- adipose:147.20 bone:78.10 skin:-
GeneChip nodata
CAGE nodata
RNA-seq nodata
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:- prostate:189.80 ovary:- testis:- heart:- muscle:- esophagus:- stomach:- intestine:- colon:-     liver/hepato:13.30        lung:101.30    bladder:- kidney:- pituitary:177.70 thyroid/parathyroid:- adrenal gland:- pancreas:56.90 breast:- salivary:-
GeneChip nodata
CAGE nodata
RNA-seq nodata

Gene Information

IDs

Refseq ID NM_139333
Gene ID 246216
Unigene ID Rn.19573
Probe set ID -
Ensembl ID ENSRNOG00000020897

Orthologous Gene

Human[1]  NM_014502
Mouse[3]  NM_134129

Chromosomal Region

1q43  [213,390,564  -  213,401,940]

Gene Family (Interpro ID)

IPR020472  G-protein beta WD-40 repeat, region
IPR003613  U box domain
IPR001680  WD40 repeat
IPR019782  WD40 repeat 2
IPR019781  WD40 repeat, subgroup
IPR011046  WD40 repeat-like-containing domain
IPR017986  WD40-repeat-containing domain
IPR015943  WD40/YVTN repeat-like-containing domain
IPR013083  Zinc finger, RING/FYVE/PHD-type

Link to Pubmed  (Pubmed ID)

12477932
23769735

Gene Ontology  (GO ID)

Biological Process

GO:0006281  DNA repair
GO:0001833  inner cell mass cell proliferation
GO:0008610  lipid biosynthetic process
GO:0045665  negative regulation of neuron differentiation
GO:0000398  nuclear mRNA splicing, via spliceosome
GO:0048711  positive regulation of astrocyte differentiation
GO:0048026  positive regulation of nuclear mRNA splicing, via spliceosome
GO:0000209  protein polyubiquitination
GO:0000245  spliceosome assembly

Cellular Component

GO:0071013  catalytic step 2 spliceosome
GO:0005737  cytoplasm
GO:0005811  lipid particle
GO:0016607  nuclear speck
GO:0005634  nucleus
GO:0000974  Prp19 complex
GO:0005819  spindle
GO:0005681  spliceosomal complex
GO:0000151  ubiquitin ligase complex

Molecular Function

GO:0003677  DNA binding
GO:0042802  identical protein binding
GO:0004842  ubiquitin-protein ligase activity
GO:0034450  ubiquitin-ubiquitin ligase activity