collagen, type IV, alpha 1

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Synonym

-

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:107.70 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:221.20 spine:- retina:4444.40 eye:71.10 artery/aorta:357.10 vein:1000000 lymphnode:- peripheral blood:- spleen:780 thymus:122.90 bone marrow:- adipose:1472.10 bone:624.80 skin:1883.20
GeneChip nodata
CAGE nodata
RNA-seq nodata
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:2031.10 prostate:227.70 ovary:570.60 testis:- heart:407.20 muscle:797.20 esophagus:- stomach:- intestine:1046.70 colon:-     liver/hepato:26.60        lung:709.20    bladder:- kidney:574.30 pituitary:355.30 thyroid/parathyroid:- adrenal gland:- pancreas:398.30 breast:- salivary:-
GeneChip nodata
CAGE nodata
RNA-seq nodata

Gene Information

IDs

Refseq ID NM_001135009
Gene ID 290905
Unigene ID Rn.53801
Probe set ID -
Ensembl ID ENSRNOG00000016281

Orthologous Gene

Human[2]  NM_001845
Mouse[2]  NM_009931

Chromosomal Region

16q12.5  [83,045,183  -  83,157,835]

Gene Family (Interpro ID)

IPR016187  C-type lectin fold

Link to Pubmed  (Pubmed ID)

8635488
8950183
12477932
16374828
16598045
17582205
18077766
19466391
19794980

Gene Ontology  (GO ID)

Biological Process

GO:0071230  cellular response to amino acid stimulus
GO:0030855  epithelial cell differentiation
GO:0007528  neuromuscular junction development

Cellular Component

GO:0005604  basement membrane
GO:0005575  cellular_component
GO:0005587  collagen type IV
GO:0005576  extracellular region

Molecular Function

GO:0005201  extracellular matrix structural constituent
GO:0003674  molecular_function
GO:0048407  platelet-derived growth factor binding