CXXC finger 1 (PHD domain)

 jump to detail

Synonym

-

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:35.90 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:122.90 bone marrow:- adipose:147.20 bone:39 skin:-
GeneChip nodata
CAGE nodata
RNA-seq nodata
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:238.90 prostate:38 ovary:114.10 testis:- heart:58.20 muscle:- esophagus:- stomach:- intestine:104.70 colon:289.90     liver/hepato:66.50        lung:152    bladder:- kidney:127.60 pituitary:59.20 thyroid/parathyroid:- adrenal gland:- pancreas:56.90 breast:- salivary:-
GeneChip nodata
CAGE nodata
RNA-seq nodata

Gene Information

IDs

Refseq ID XM_238016
Gene ID 291440
Unigene ID Rn.86349
Probe set ID -
Ensembl ID -

Orthologous Gene

Human [0]  
Mouse [0]  

Chromosomal Region

18q12.2  [71,006,887  -  71,011,939]

Gene Family (Interpro ID)

IPR011011  Zinc finger, FYVE/PHD-type
IPR019787  Zinc finger, PHD-finger
IPR001965  Zinc finger, PHD-type
IPR013083  Zinc finger, RING/FYVE/PHD-type

Link to Pubmed  (Pubmed ID)

12477932

Gene Ontology  (GO ID)

Biological Process

GO:0051568  histone H3-K4 methylation
GO:0045893  positive regulation of transcription, DNA-dependent
GO:0006355  regulation of transcription, DNA-dependent

Cellular Component

GO:0035097  histone methyltransferase complex
GO:0016363  nuclear matrix
GO:0016607  nuclear speck
GO:0005634  nucleus
GO:0048188  Set1C/COMPASS complex

Molecular Function

GO:0042800  histone methyltransferase activity (H3-K4 specific)
GO:0045322  unmethylated CpG binding
GO:0008270  zinc ion binding