cleavage and polyadenylation specific factor 5

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Synonym

-

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:95.70 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:73.70 spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:78 thymus:- bone marrow:- adipose:- bone:78.10 skin:-
GeneChip nodata
CAGE nodata
RNA-seq nodata
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:39.80 prostate:38 ovary:- testis:- heart:155.10 muscle:- esophagus:- stomach:- intestine:- colon:-     liver/hepato:53.20        lung:50.70    bladder:- kidney:- pituitary:59.20 thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-
GeneChip nodata
CAGE nodata
RNA-seq nodata

Gene Information

IDs

Refseq ID NM_001039004
Gene ID 291877
Unigene ID Rn.199052
Probe set ID -
Ensembl ID ENSRNOG00000042983

Orthologous Gene

Human[2]  NM_007006
Mouse[2]  NM_026623

Chromosomal Region

19p12  [11,412,093  -  11,428,702]

Gene Family (Interpro ID)

IPR000086  NUDIX hydrolase domain
IPR015797  NUDIX hydrolase domain-like

Link to Pubmed  (Pubmed ID)

12477932
15489334
16854843
22898046

Gene Ontology  (GO ID)

Biological Process

GO:0006378  mRNA polyadenylation
GO:0006397  mRNA processing
GO:0051262  protein tetramerization

Cellular Component

GO:0005813  centrosome
GO:0005849  mRNA cleavage factor complex
GO:0005634  nucleus
GO:0042382  paraspeckles

Molecular Function

GO:0017091  AU-rich element binding
GO:0042826  histone deacetylase binding
GO:0016787  hydrolase activity
GO:0003729  mRNA binding
GO:0042803  protein homodimerization activity
GO:0003723  RNA binding