high mobility group box 2

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Synonym

-

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST nodata
GeneChip cerebrum:3.65 cerebellum:3.83 brain stem:3.50 corpus callosum/glia:- pineal gland:- peripheral nerve:3.46 spine:- retina:- eye:5.22 artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:7.02 thymus:8.45 bone marrow:7.73 adipose:- bone:- skin:-
CAGE nodata
RNA-seq nodata
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST nodata
GeneChip uterus:- placenta:- prostate:- ovary:- testis:- heart:3.95 muscle:4.19 esophagus:- stomach:- intestine:6.31 colon:6.12 liver/hepato:- lung:- bladder:- kidney:3.98 pituitary:3.94 thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-
CAGE nodata
RNA-seq nodata

Gene Information

IDs

Refseq ID NM_017187
Gene ID 29395
Unigene ID -
Probe set ID D84418_r_at  [RG_U34A]
Ensembl ID ENSRNOG00000013167

Orthologous Gene

Human [0]  
Mouse [0]  

Chromosomal Region

16p11  [36,131,323  -  36,133,793]
11q12  [48,276,410  -  48,277,042]

Gene Family (Interpro ID)

IPR000910  High mobility group, HMG1/HMG2
IPR000135  High mobility group, HMG1/HMG2, subgroup
IPR009071  High mobility group, superfamily

Link to Pubmed  (Pubmed ID)

457681
1525238
2583185
2719962
7763232
8432381
11279268
12477932
15005629
15489334

Gene Ontology  (GO ID)

Biological Process

GO:0006288  base-excision repair, DNA ligation
GO:0007049  cell cycle
GO:0007399  nervous system development
GO:0031100  organ regeneration
GO:0051054  positive regulation of DNA metabolic process
GO:0045893  positive regulation of transcription, DNA-dependent
GO:0006357  regulation of transcription from RNA polymerase II promoter

Cellular Component

GO:0000793  condensed chromosome
GO:0005737  cytoplasm
GO:0005634  nucleus
GO:0048471  perinuclear region of cytoplasm

Molecular Function

GO:0008301  DNA bending activity
GO:0003690  double-stranded DNA binding
GO:0008289  lipid binding
GO:0031493  nucleosomal histone binding