endothelial differentiation-related factor 1

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Synonym

-

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:- cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:110.60 spine:- retina:- eye:177.70 artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:245.80 bone marrow:- adipose:294.40 bone:39 skin:-
GeneChip cerebrum:8.44 cerebellum:8.92 brain stem:8.03 corpus callosum/glia:- pineal gland:- peripheral nerve:9.19 spine:- retina:- eye:8.24 artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:8.53 thymus:9.18 bone marrow:8.46 adipose:- bone:- skin:-
CAGE nodata
RNA-seq nodata
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:39.80 prostate:38 ovary:228.20 testis:- heart:58.20 muscle:531.50 esophagus:- stomach:1077.60 intestine:- colon:289.90     liver/hepato:-        lung:101.30    bladder:- kidney:63.80 pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:56.90 breast:- salivary:-
GeneChip uterus:- placenta:- prostate:- ovary:- testis:- heart:8.66 muscle:8.94 esophagus:- stomach:- intestine:9.75 colon:9.60 liver/hepato:- lung:- bladder:- kidney:9.14 pituitary:8.19 thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-
CAGE nodata
RNA-seq nodata

Gene Information

IDs

Refseq ID NM_001106557
Gene ID 296570
Unigene ID Rn.17092
Probe set ID rc_AA891746_at  [RG_U34A]
Ensembl ID ENSRNOG00000016272

Orthologous Gene

Human[4]  NM_003792, NM_153200
Mouse[2]  NM_021519, NM_153200

Chromosomal Region

3p13  [3,727,811  -  3,732,116]

Gene Family (Interpro ID)

IPR001387  Helix-turn-helix type 3
IPR010982  Lambda repressor-like, DNA-binding

Link to Pubmed  (Pubmed ID)

9795107
12477932
12729799
15489334
16854843

Gene Ontology  (GO ID)

Biological Process

GO:0030154  cell differentiation
GO:0007275  multicellular organismal development
GO:0043388  positive regulation of DNA binding
GO:0006355  regulation of transcription, DNA-dependent
GO:0006351  transcription, DNA-dependent

Cellular Component

GO:0005737  cytoplasm
GO:0005730  nucleolus
GO:0005634  nucleus
GO:0005669  transcription factor TFIID complex

Molecular Function

GO:0005516  calmodulin binding
GO:0004402  histone acetyltransferase activity
GO:0008168  methyltransferase activity
GO:0043565  sequence-specific DNA binding
GO:0003713  transcription coactivator activity
GO:0003700  transcription factor activity