matrix metallopeptidase 1a (interstitial collagenase)

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Synonym

normal 40 tissues
data not exists

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain

blood

connective

EST

cerebrum:-

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:-

retina:-

eye:-

artery/aorta:-

vein:-

lymphnode:-

peripheral blood:-

spleen:-

thymus:-

bone marrow:-

adipose:-

bone:-

skin:-

GeneChip

nodata

CAGE

nodata

RNA-seq

nodata

reproductive

muscular

alimentary

liver

lung

urinary

endo/exo-crine

EST

uterus:-

placenta:-

prostate:-

ovary:-

testis:-

heart:-

muscle:-

esophagus:-

stomach:-

intestine:-

colon:-

liver/hepato:-

lung:-

bladder:-

kidney:-

pituitary:-

thyroid/parathyroid:-

adrenal gland:-

pancreas:-

breast:-

salivary:-

GeneChip

nodata

CAGE

nodata

RNA-seq

nodata

IDs

Refseq ID	NM_001134530
Gene ID	300339
Unigene ID	Rn.79007
Probe set ID	-
Ensembl ID	ENSRNOG00000032353

Orthologous Gene

Human[2]	NM_001145938, NM_002421
Mouse[2]	NM_032007, NM_032006

Chromosomal Region

8q11 [4,333,773 - 4,354,282]

Search genes near this gene
- Between -5kb and +5kb
- Between -10kb and +10kb

Gene Family (Interpro ID)

IPR001506	Peptidase M12A, astacin
IPR006026	Peptidase, metallopeptidases

Gene Ontology (GO ID)

Biological Process

GO:0006725	cellular aromatic compound metabolic process
GO:0071312	cellular response to alkaloid
GO:0071498	cellular response to fluid shear stress
GO:0071347	cellular response to interleukin-1
GO:0071283	cellular response to iron(III) ion
GO:0071222	cellular response to lipopolysaccharide
GO:0071407	cellular response to organic cyclic substance
GO:0071375	cellular response to peptide hormone stimulus
GO:0071356	cellular response to tumor necrosis factor
GO:0071305	cellular response to vitamin D
GO:0006534	cysteine metabolic process
GO:0033494	ferulate metabolic process
GO:0001553	luteinization
GO:0001554	luteolysis
GO:0008152	metabolic process
GO:0005976	polysaccharide metabolic process
GO:0010950	positive regulation of endopeptidase activity
GO:0010763	positive regulation of fibroblast migration
GO:0014911	positive regulation of smooth muscle cell migration
GO:0006508	proteolysis
GO:0042493	response to drug
GO:0014854	response to inactivity
GO:0009612	response to mechanical stimulus

Cellular Component

GO:0005737	cytoplasm
GO:0031012	extracellular matrix
GO:0005615	extracellular space

Molecular Function

GO:0005509	calcium ion binding
GO:0004222	metalloendopeptidase activity
GO:0008233	peptidase activity
GO:0005515	protein binding
GO:0008270	zinc ion binding

matrix metallopeptidase 1a (interstitial collagenase)

Synonym

Expression Pattern

Choropleth map on BodyParts3D

Classification in 40 Organs

Gene Information

IDs

Orthologous Gene

Chromosomal Region

Gene Family (Interpro ID)

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

Cellular Component

Molecular Function