alkB, alkylation repair homolog 2 (E. coli)

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Synonym

-

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST nodata
GeneChip cerebrum:6.82 cerebellum:6.76 brain stem:7.06 corpus callosum/glia:- pineal gland:- peripheral nerve:7.10 spine:- retina:- eye:6.84 artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:6.85 thymus:6.90 bone marrow:6.70 adipose:- bone:- skin:-
CAGE nodata
RNA-seq nodata
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST nodata
GeneChip uterus:- placenta:- prostate:- ovary:- testis:- heart:6.87 muscle:6.57 esophagus:- stomach:- intestine:6.67 colon:6.86 liver/hepato:- lung:- bladder:- kidney:6.96 pituitary:6.80 thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-
CAGE nodata
RNA-seq nodata

Gene Information

IDs

Refseq ID NM_001126273
Gene ID 304578
Unigene ID -
Probe set ID rc_H31842_at  [RG_U34A]
Ensembl ID ENSRNOG00000028584

Orthologous Gene

Human[3]  NM_001001655, NM_001145374, NM_001145375, NM_001205179, NM_001205180
Mouse[1]  NM_175016, NM_001145374, NM_001145375, NM_001205179, NM_001205180

Chromosomal Region

12q16  [43,531,682  -  43,536,316]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

12477932

Gene Ontology  (GO ID)

Biological Process

GO:0006307  DNA dealkylation
GO:0080111  DNA demethylation
GO:0055114  oxidation reduction

Molecular Function

GO:0051747  DNA demethylase activity
GO:0043734  DNA-N1-methyladenine dioxygenase activity
GO:0004519  endonuclease activity
GO:0004527  exonuclease activity
GO:0008198  ferrous iron binding
GO:0016706  oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors