excision repair cross-complementing rodent repair deficiency, complementation group 6

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Synonym

-

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:23.90 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:36.90 spine:- retina:- eye:71.10 artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:78 thymus:- bone marrow:- adipose:- bone:- skin:-
GeneChip nodata
CAGE nodata
RNA-seq nodata
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:- prostate:113.90 ovary:114.10 testis:- heart:38.80 muscle:- esophagus:- stomach:- intestine:104.70 colon:-     liver/hepato:26.60        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-
GeneChip nodata
CAGE nodata
RNA-seq nodata

Gene Information

IDs

Refseq ID XM_224627
Gene ID 306274
Unigene ID Rn.19370
Probe set ID -
Ensembl ID -

Orthologous Gene

Human [0]  
Mouse [0]  

Chromosomal Region

16p16  [8,024,881  -  8,091,587]

Gene Family (Interpro ID)

IPR014001  DEAD-like helicase, N-terminal
IPR014021  Helicase, superfamily 1/2, ATP-binding domain

Link to Pubmed  (Pubmed ID)

18166977
22824526

Gene Ontology  (GO ID)

Biological Process

GO:0007256  activation of JNKK activity
GO:0007257  activation of JUN kinase activity
GO:0006284  base-excision repair
GO:0008150  biological_process
GO:0008630  DNA damage response, signal transduction resulting in induction of apoptosis
GO:0006281  DNA repair
GO:0035264  multicellular organism growth
GO:0045494  photoreceptor cell maintenance
GO:0032786  positive regulation of RNA elongation
GO:0006290  pyrimidine dimer repair
GO:0032784  regulation of RNA elongation
GO:0006974  response to DNA damage stimulus
GO:0010332  response to gamma radiation
GO:0006979  response to oxidative stress
GO:0000303  response to superoxide
GO:0009636  response to toxin
GO:0009411  response to UV
GO:0010224  response to UV-B
GO:0010165  response to X-ray
GO:0006283  transcription-coupled nucleotide-excision repair

Cellular Component

GO:0005575  cellular_component
GO:0005730  nucleolus
GO:0005654  nucleoplasm
GO:0005634  nucleus
GO:0008023  transcription elongation factor complex

Molecular Function

GO:0005524  ATP binding
GO:0003682  chromatin binding
GO:0003677  DNA binding
GO:0003678  DNA helicase activity
GO:0008094  DNA-dependent ATPase activity
GO:0004386  helicase activity
GO:0003674  molecular_function
GO:0008022  protein C-terminus binding
GO:0032403  protein complex binding
GO:0047485  protein N-terminus binding