spectrin, beta, non-erythrocytic 4

 jump to detail

Synonym

-

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:23.90 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:110.60 spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
GeneChip nodata
CAGE nodata
RNA-seq nodata
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:- prostate:- ovary:- testis:- heart:- muscle:- esophagus:- stomach:- intestine:- colon:-     liver/hepato:-        lung:-    bladder:- kidney:63.80 pituitary:118.40 thyroid/parathyroid:- adrenal gland:- pancreas:284.50 breast:- salivary:-
GeneChip nodata
CAGE nodata
RNA-seq nodata

Gene Information

IDs

Refseq ID XM_001072073
Gene ID 308458
Unigene ID Rn.63104
Probe set ID -
Ensembl ID -

Orthologous Gene

Human [0]  
Mouse [0]  

Chromosomal Region

1q21  [82,436,627  -  82,523,827]

Gene Family (Interpro ID)

IPR016146  Calponin-homology
IPR001715  Calponin-like actin-binding
IPR001849  Pleckstrin homology
IPR002017  Spectrin repeat
IPR018159  Spectrin/alpha-actinin
IPR001605  Spectrin/pleckstrin-like

Link to Pubmed  (Pubmed ID)

11086001
12477932
23239625

Gene Ontology  (GO ID)

Biological Process

GO:0030534  adult behavior
GO:0007628  adult walking behavior
GO:0007409  axonogenesis
GO:0008150  biological_process
GO:0034613  cellular protein localization
GO:0021952  central nervous system projection neuron axonogenesis
GO:0045162  clustering of voltage-gated sodium channels
GO:0090002  establishment of protein localization in plasma membrane
GO:0009566  fertilization
GO:0010459  negative regulation of heart rate
GO:0040018  positive regulation of multicellular organism growth
GO:0033135  regulation of peptidyl-serine phosphorylation
GO:0002028  regulation of sodium ion transport
GO:0022414  reproductive process
GO:0007605  sensory perception of sound
GO:0019226  transmission of nerve impulse

Cellular Component

GO:0005912  adherens junction
GO:0030424  axon
GO:0043203  axon hillock
GO:0070852  cell body fiber
GO:0043025  cell soma
GO:0005575  cellular_component
GO:0005737  cytoplasm
GO:0043194  initial segment
GO:0016020  membrane
GO:0033268  node of Ranvier
GO:0016363  nuclear matrix
GO:0033270  paranode region of axon
GO:0005886  plasma membrane
GO:0016605  PML body
GO:0008091  spectrin

Molecular Function

GO:0003779  actin binding
GO:0030506  ankyrin binding
GO:0003674  molecular_function
GO:0019902  phosphatase binding
GO:0005543  phospholipid binding
GO:0030507  spectrin binding
GO:0005200  structural constituent of cytoskeleton