Hermansky-Pudlak syndrome 5

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Synonym

-

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:12 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:78 thymus:- bone marrow:- adipose:294.40 bone:- skin:-
GeneChip nodata
CAGE nodata
RNA-seq nodata
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:39.80 prostate:- ovary:114.10 testis:- heart:38.80 muscle:- esophagus:- stomach:- intestine:- colon:-     liver/hepato:-        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-
GeneChip nodata
CAGE nodata
RNA-seq nodata

Gene Information

IDs

Refseq ID NM_001135612
Gene ID 308598
Unigene ID Rn.127939
Probe set ID -
Ensembl ID ENSRNOG00000012232

Orthologous Gene

Human[3]  NM_007216, NM_181507, NM_181508
Mouse[3]  NM_001005247, NM_001005248, NM_001167864

Chromosomal Region

1q22  [97,279,644  -  97,351,792]

Gene Family (Interpro ID)

IPR001680  WD40 repeat
IPR011046  WD40 repeat-like-containing domain
IPR015943  WD40/YVTN repeat-like-containing domain

Link to Pubmed  (Pubmed ID)

12477932

Gene Ontology  (GO ID)

Biological Process

GO:0006953  acute-phase response
GO:0007596  blood coagulation
GO:0006996  organelle organization
GO:0043473  pigmentation

Cellular Component

GO:0005576  extracellular region
GO:0034364  high-density lipoprotein particle