tubby like protein 1

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Synonym

-

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:- cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:142.20 artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:39 skin:-
GeneChip cerebrum:7.34 cerebellum:6.91 brain stem:7.06 corpus callosum/glia:- pineal gland:- peripheral nerve:7.30 spine:- retina:- eye:7.24 artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:6.82 thymus:6.72 bone marrow:7.01 adipose:- bone:- skin:-
CAGE nodata
RNA-seq nodata
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:39.80 prostate:- ovary:114.10 testis:- heart:77.60 muscle:- esophagus:- stomach:- intestine:- colon:-     liver/hepato:-        lung:50.70    bladder:- kidney:- pituitary:118.40 thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-
GeneChip uterus:- placenta:- prostate:- ovary:- testis:- heart:7.08 muscle:7.03 esophagus:- stomach:- intestine:6.90 colon:6.84 liver/hepato:- lung:- bladder:- kidney:6.89 pituitary:7.16 thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-
CAGE nodata
RNA-seq nodata

Gene Information

IDs

Refseq ID NM_001107642
Gene ID 309900
Unigene ID Rn.25406
Probe set ID rc_AA859533_at  [RG_U34A]
Ensembl ID ENSRNOG00000000507

Orthologous Gene

Human[1]  NM_003322
Mouse[1]  NM_021478

Chromosomal Region

20p12  [6,592,448  -  6,604,349]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

9462750
23701314

Gene Ontology  (GO ID)

Biological Process

GO:0008150  biological_process
GO:0016358  dendrite development
GO:0009584  detection of visible light
GO:0042462  eye photoreceptor cell development
GO:0007186  G-protein coupled receptor protein signaling pathway
GO:0045494  photoreceptor cell maintenance
GO:0007602  phototransduction
GO:0050766  positive regulation of phagocytosis
GO:0060041  retina development in camera-type eye

Cellular Component

GO:0042995  cell projection
GO:0005575  cellular_component
GO:0001917  photoreceptor inner segment
GO:0001750  photoreceptor outer segment
GO:0005886  plasma membrane
GO:0045202  synapse

Molecular Function

GO:0051015  actin filament binding
GO:0008020  G-protein coupled photoreceptor activity
GO:0003674  molecular_function
GO:0005546  phosphatidylinositol-4,5-bisphosphate binding