PC4 and SFRS1 interacting protein 1

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Synonym

-

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:263.20 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:73.70 spine:- retina:- eye:71.10 artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:122.90 bone marrow:- adipose:- bone:78.10 skin:-
GeneChip nodata
CAGE nodata
RNA-seq nodata
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:79.60 prostate:38 ovary:- testis:164.70 heart:135.70 muscle:- esophagus:- stomach:- intestine:- colon:-     liver/hepato:-        lung:152    bladder:- kidney:63.80 pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-
GeneChip nodata
CAGE nodata
RNA-seq nodata

Gene Information

IDs

Refseq ID NM_175765
Gene ID 313323
Unigene ID Rn.93075
Probe set ID -
Ensembl ID ENSRNOG00000011498

Orthologous Gene

Human[5]  NM_001128217, NM_021144, NM_033222
Mouse[1]  NM_133948, NM_021144, NM_033222

Chromosomal Region

5q31  [102,304,948  -  102,337,108]

Gene Family (Interpro ID)

IPR020478  A.T hook-like
IPR000116  High mobility group, HMG-I/HMG-Y
IPR017923  TFIIS N-terminal
IPR014765  Transcription elongation factor, TFIIS/CRSP70, N-terminal
IPR003617  Transcription elongation factor, TFIIS/CRSP70, N-terminal, sub-type
IPR010990  Transcription elongation factor, TFIIS/elongin A/CRSP70, N-terminal

Link to Pubmed  (Pubmed ID)

3366776
12477932
12692670
18652779
21345933

Gene Ontology  (GO ID)

Biological Process

GO:0000395  nuclear mRNA 5'-splice site recognition
GO:0045944  positive regulation of transcription from RNA polymerase II promoter
GO:0006355  regulation of transcription, DNA-dependent
GO:0009408  response to heat
GO:0006979  response to oxidative stress
GO:0006351  transcription, DNA-dependent

Cellular Component

GO:0005720  nuclear heterochromatin
GO:0034399  nuclear periphery
GO:0005730  nucleolus
GO:0005654  nucleoplasm
GO:0005634  nucleus

Molecular Function

GO:0003682  chromatin binding
GO:0033613  transcription activator binding