leucine-rich PPR-motif containing

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Synonym

-

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:107.70 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:110.60 spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:78 thymus:- bone marrow:- adipose:147.20 bone:78.10 skin:235.40
GeneChip nodata
CAGE nodata
RNA-seq nodata
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:39.80 prostate:38 ovary:114.10 testis:- heart:213.30 muscle:265.70 esophagus:- stomach:- intestine:209.30 colon:-     liver/hepato:93.10        lung:101.30    bladder:1129.90 kidney:- pituitary:59.20 thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-
GeneChip nodata
CAGE nodata
RNA-seq nodata

Gene Information

IDs

Refseq ID NM_001008519
Gene ID 313867
Unigene ID Rn.92051
Probe set ID -
Ensembl ID ENSRNOG00000005877

Orthologous Gene

Human[2]  NM_133259
Mouse[1]  NM_028233

Chromosomal Region

6q12  [8,086,607  -  8,168,252]

Gene Family (Interpro ID)

IPR000276  7TM GPCR, rhodopsin-like
IPR016024  Armadillo-type fold
IPR017452  GPCR, rhodopsin-like superfamily
IPR001418  Opioid receptor
IPR001420  X opioid receptor

Link to Pubmed  (Pubmed ID)

12529507
15525270
17050673
17339062

Gene Ontology  (GO ID)

Biological Process

GO:0008150  biological_process
GO:0051028  mRNA transport
GO:0000961  negative regulation of mitochondrial RNA catabolic process
GO:0070129  regulation of mitochondrial translation
GO:0006355  regulation of transcription, DNA-dependent
GO:0006351  transcription, DNA-dependent

Cellular Component

GO:0005575  cellular_component
GO:0000794  condensed nuclear chromosome
GO:0005737  cytoplasm
GO:0005856  cytoskeleton
GO:0005874  microtubule
GO:0042645  mitochondrial nucleoid
GO:0005739  mitochondrion
GO:0005637  nuclear inner membrane
GO:0005640  nuclear outer membrane
GO:0005654  nucleoplasm
GO:0005634  nucleus
GO:0048471  perinuclear region of cytoplasm
GO:0030529  ribonucleoprotein complex

Molecular Function

GO:0051015  actin filament binding
GO:0048487  beta-tubulin binding
GO:0003677  DNA binding
GO:0003674  molecular_function
GO:0003723  RNA binding
GO:0003697  single-stranded DNA binding