SATB homeobox 1

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Synonym

-

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:- cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
GeneChip nodata
CAGE nodata
RNA-seq nodata
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:79.60 prostate:- ovary:- testis:- heart:19.40 muscle:- esophagus:- stomach:- intestine:104.70 colon:-     liver/hepato:-        lung:50.70    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-
GeneChip nodata
CAGE nodata
RNA-seq nodata

Gene Information

IDs

Refseq ID NM_001012129
Gene ID 316164
Unigene ID Rn.214622
Probe set ID -
Ensembl ID ENSRNOG00000012942

Orthologous Gene

Human[2]  NM_001131010, NM_001195470, NM_002971
Mouse[12]  NM_001163630, NM_001163631, NM_001163632, NM_009122

Chromosomal Region

9q11  [3,307,651  -  3,391,345]

Gene Family (Interpro ID)

IPR001356  Homeobox
IPR009057  Homeodomain-like
IPR012287  Homeodomain-related
IPR010982  Lambda repressor-like, DNA-binding

Link to Pubmed  (Pubmed ID)

12477932

Gene Ontology  (GO ID)

Biological Process

GO:0050798  activated T cell proliferation
GO:0043367  CD4-positive, alpha beta T cell differentiation
GO:0043374  CD8-positive, alpha-beta T cell differentiation
GO:0006325  chromatin organization
GO:0006338  chromatin remodeling
GO:0008544  epidermis development
GO:0016571  histone methylation
GO:0000122  negative regulation of transcription from RNA polymerase II promoter
GO:0060004  reflex
GO:0006355  regulation of transcription, DNA-dependent
GO:0042110  T cell activation

Cellular Component

GO:0000785  chromatin
GO:0005720  nuclear heterochromatin
GO:0016363  nuclear matrix
GO:0005634  nucleus
GO:0016605  PML body

Molecular Function

GO:0003682  chromatin binding
GO:0003677  DNA binding
GO:0043565  sequence-specific DNA binding
GO:0003700  transcription factor activity