EGF-like, fibronectin type III and laminin G domains

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Synonym

-

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:47.90 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:36.90 spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
GeneChip nodata
CAGE nodata
RNA-seq nodata
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:- prostate:- ovary:- testis:- heart:19.40 muscle:- esophagus:- stomach:- intestine:- colon:-     liver/hepato:-        lung:202.60    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-
GeneChip nodata
CAGE nodata
RNA-seq nodata

Gene Information

IDs

Refseq ID NM_001108938
Gene ID 365691
Unigene ID Rn.27713
Probe set ID -
Ensembl ID ENSRNOG00000012058

Orthologous Gene

Human[4]  NM_001205301, NM_152403, NM_182798, NM_182799, NM_182801
Mouse[1]  NM_178748, NM_152403, NM_182798, NM_182799, NM_182801

Chromosomal Region

2q16  [56,493,065  -  56,666,659]

Gene Family (Interpro ID)

IPR008985  Concanavalin A-like lectin/glucanase
IPR013320  Concanavalin A-like lectin/glucanase, subgroup
IPR001881  EGF-like calcium-binding
IPR000742  EGF-like, type 3
IPR003961  Fibronectin, type III
IPR008957  Fibronectin, type III-like fold
IPR001791  Laminin G
IPR012679  Laminin G, subdomain 1
IPR012680  Laminin G, subdomain 2

Link to Pubmed  (Pubmed ID)

12477932

Gene Ontology  (GO ID)

Biological Process

GO:0030198  extracellular matrix organization
GO:0019800  peptide cross-linking via chondroitin 4-sulfate glycosaminoglycan
GO:0010811  positive regulation of cell-substrate adhesion

Cellular Component

GO:0005604  basement membrane
GO:0030054  cell junction
GO:0031012  extracellular matrix
GO:0005614  interstitial matrix
GO:0005578  proteinaceous extracellular matrix
GO:0045202  synapse

Molecular Function

GO:0005539  glycosaminoglycan binding