SFFV proviral integration 1

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Synonym

-

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:- cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:78 thymus:- bone marrow:- adipose:147.20 bone:39 skin:-
GeneChip nodata
CAGE nodata
RNA-seq nodata
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:- prostate:- ovary:- testis:- heart:- muscle:- esophagus:- stomach:- intestine:- colon:-     liver/hepato:-        lung:50.70    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-
GeneChip nodata
CAGE nodata
RNA-seq nodata

Gene Information

IDs

Refseq ID NM_001005892
Gene ID 366126
Unigene ID Rn.212982
Probe set ID -
Ensembl ID ENSRNOG00000012172

Orthologous Gene

Human[2]  NM_001080547, NM_003120
Mouse[1]  NM_011355, NM_003120

Chromosomal Region

3q24  [75,456,353  -  75,475,721]

Gene Family (Interpro ID)

IPR000418  Ets
IPR011991  Winged helix repressor DNA-binding

Link to Pubmed  (Pubmed ID)

12477932
15304324
15688197
15867096
24282365

Gene Ontology  (GO ID)

Biological Process

GO:0060033  anatomical structure regression
GO:0030218  erythrocyte differentiation
GO:0030851  granulocyte differentiation
GO:0043966  histone H3 acetylation
GO:0044027  hypermethylation of CpG island
GO:0006917  induction of apoptosis
GO:0030098  lymphocyte differentiation
GO:0002320  lymphoid progenitor cell differentiation
GO:0030225  macrophage differentiation
GO:0043011  myeloid dendritic cell differentiation
GO:0002573  myeloid leukocyte differentiation
GO:0045814  negative regulation of gene expression, epigenetic
GO:0045347  negative regulation of MHC class II biosynthetic process
GO:0045892  negative regulation of transcription, DNA-dependent
GO:0045944  positive regulation of transcription from RNA polymerase II promoter
GO:0045893  positive regulation of transcription, DNA-dependent
GO:0045646  regulation of erythrocyte differentiation
GO:0006357  regulation of transcription from RNA polymerase II promoter
GO:0006355  regulation of transcription, DNA-dependent
GO:0035019  somatic stem cell maintenance
GO:0001944  vasculature development

Cellular Component

GO:0000790  nuclear chromatin
GO:0005634  nucleus

Molecular Function

GO:0003677  DNA binding
GO:0051525  NFAT protein binding
GO:0003705  RNA polymerase II transcription factor activity, enhancer binding
GO:0043565  sequence-specific DNA binding
GO:0003700  transcription factor activity