plectin 1

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Synonym

-

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:- cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
GeneChip cerebrum:8.23 cerebellum:8.11 brain stem:8.41 corpus callosum/glia:- pineal gland:- peripheral nerve:7.94 spine:- retina:- eye:8.73 artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:8.42 thymus:8.19 bone marrow:8.31 adipose:- bone:- skin:-
CAGE nodata
RNA-seq nodata
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:- prostate:- ovary:- testis:988.10 heart:- muscle:- esophagus:- stomach:- intestine:- colon:-     liver/hepato:-        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-
GeneChip uterus:- placenta:- prostate:- ovary:- testis:- heart:7.92 muscle:8.21 esophagus:- stomach:- intestine:8.03 colon:7.82 liver/hepato:- lung:- bladder:- kidney:7.96 pituitary:7.96 thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-
CAGE nodata
RNA-seq nodata

Gene Information

IDs

Refseq ID NM_001164303
Gene ID 64204
Unigene ID Rn.108510
Probe set ID U96275_at  [RG_U34A]
Ensembl ID ENSRNOG00000023781

Orthologous Gene

Human[16]  NM_000445, NM_201378, NM_201379, NM_201380, NM_201381, NM_201382, NM_201383, NM_201384
Mouse[30]  NM_001163540, NM_001163542, NM_001163549, NM_001164203, NM_011117, NM_201385, NM_201386, NM_201387, NM_201388, NM_201389, NM_201390, NM_201391, NM_201392, NM_201393, NM_201394

Chromosomal Region

7q34  [114,202,744  -  114,262,379]

Gene Family (Interpro ID)

IPR016146  Calponin-homology
IPR001715  Calponin-like actin-binding
IPR002017  Spectrin repeat
IPR018159  Spectrin/alpha-actinin

Link to Pubmed  (Pubmed ID)

2023931
2050743
8633055
8686756
8830774
8894687
9177781
10556294
11482454
11841995
12095991
12200133
12389737
14559777
14672974
15632090
16392042
16392043
16641100
17606998
19945614
21149456
21915674
22082260

Gene Ontology  (GO ID)

Biological Process

GO:0030855  epithelial cell differentiation
GO:0007565  female pregnancy
GO:0031581  hemidesmosome assembly
GO:0007584  response to nutrient

Cellular Component

GO:0016324  apical plasma membrane
GO:0009925  basal plasma membrane
GO:0043292  contractile fiber
GO:0043034  costamere
GO:0005737  cytoplasm
GO:0005856  cytoskeleton
GO:0005925  focal adhesion
GO:0030056  hemidesmosome
GO:0045111  intermediate filament cytoskeleton
GO:0048471  perinuclear region of cytoplasm
GO:0042383  sarcolemma
GO:0016528  sarcoplasm

Molecular Function

GO:0003779  actin binding
GO:0030506  ankyrin binding
GO:0008092  cytoskeletal protein binding
GO:0047485  protein N-terminus binding
GO:0005200  structural constituent of cytoskeleton
GO:0008307  structural constituent of muscle