cadherin 1

 jump to detail

Synonym

-

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:119.60 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:184.40 spine:- retina:- eye:142.20 artery/aorta:357.10 vein:- lymphnode:- peripheral blood:- spleen:- thymus:122.90 bone marrow:- adipose:- bone:78.10 skin:-
GeneChip nodata
CAGE nodata
RNA-seq nodata
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:39.80 prostate:113.90 ovary:- testis:329.40 heart:58.20 muscle:- esophagus:- stomach:- intestine:- colon:-     liver/hepato:-        lung:101.30    bladder:- kidney:63.80 pituitary:118.40 thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-
GeneChip nodata
CAGE nodata
RNA-seq nodata

Gene Information

IDs

Refseq ID NM_031334
Gene ID 83502
Unigene ID Rn.13031
Probe set ID -
Ensembl ID ENSRNOG00000020151

Orthologous Gene

Human[2]  NM_004360
Mouse[1]  NM_009864

Chromosomal Region

19q12  [36,442,693  -  36,512,091]

Gene Family (Interpro ID)

IPR002126  Cadherin
IPR015919  Cadherin-like
IPR006644  Dystroglycan-type cadherin-like

Link to Pubmed  (Pubmed ID)

10650949
11340163
12032067
12123610
12127823
12237291
12387456
12639940
12640664
12651624
15203750
15263019
15771627
15785075
15831593
15910750
15930126
16153441
16329148
16671876
16682529
16733663
16924102
16955247
16997938
17120308
17167984
17295234
17373711
17605082
17649807
17656222
17660459
17760743
17762162
17894941
17906660
17982281
18008331
18035404
18056176
18097581
18183597
18210882
18213475
18225549
18279593
18295959
18551621
18818692
19258396
19590041
19956566
20091493
20495078
20705680
20881055
21399649
21540309
21853397
22114281
22288108
22549778
23080431
23273176
23727062
24001804

Gene Ontology  (GO ID)

Biological Process

GO:0016337  cell-cell adhesion
GO:0071230  cellular response to amino acid stimulus
GO:0071285  cellular response to lithium ion
GO:0090102  cochlea development
GO:0003382  epithelial cell morphogenesis
GO:0007156  homophilic cell adhesion
GO:0001701  in utero embryonic development
GO:0060576  intestinal epithelial cell development
GO:0022408  negative regulation of cell-cell adhesion
GO:0050680  negative regulation of epithelial cell proliferation
GO:0090090  negative regulation of Wnt receptor signaling pathway through beta-catenin
GO:0031175  neuron projection development
GO:0021983  pituitary gland development
GO:0042993  positive regulation of transcription factor import into nucleus
GO:0045893  positive regulation of transcription, DNA-dependent
GO:0051260  protein homooligomerization
GO:0019538  protein metabolic process
GO:0060693  regulation of branching involved in salivary gland morphogenesis
GO:0043281  regulation of caspase activity
GO:0032880  regulation of protein localization
GO:0033561  regulation of water loss via skin
GO:0042493  response to drug
GO:0010033  response to organic substance
GO:0009636  response to toxin
GO:0060662  salivary gland cavitation
GO:0007605  sensory perception of sound
GO:0007416  synapse assembly
GO:0070830  tight junction assembly
GO:0001829  trophectodermal cell differentiation

Cellular Component

GO:0015629  actin cytoskeleton
GO:0005912  adherens junction
GO:0016235  aggresome
GO:0043296  apical junction complex
GO:0045177  apical part of cell
GO:0030424  axon
GO:0016323  basolateral plasma membrane
GO:0016342  catenin complex
GO:0030054  cell junction
GO:0009986  cell surface
GO:0005913  cell-cell adherens junction
GO:0005911  cell-cell junction
GO:0005737  cytoplasm
GO:0005768  endosome
GO:0005925  focal adhesion
GO:0005794  Golgi apparatus
GO:0016021  integral to membrane
GO:0009898  internal side of plasma membrane
GO:0043219  lateral loop
GO:0016328  lateral plasma membrane
GO:0043679  nerve terminal
GO:0033268  node of Ranvier
GO:0048471  perinuclear region of cytoplasm
GO:0005886  plasma membrane
GO:0043220  Schmidt-Lanterman cleft
GO:0005802  trans-Golgi network

Molecular Function

GO:0030506  ankyrin binding
GO:0008013  beta-catenin binding
GO:0005509  calcium ion binding
GO:0045295  gamma-catenin binding
GO:0032794  GTPase activating protein binding
GO:0005515  protein binding
GO:0019904  protein domain specific binding
GO:0019903  protein phosphatase binding