protein tyrosine phosphatase, receptor type, R

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Synonym

-

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:35.90 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:147.50 spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
GeneChip cerebrum:6.47 cerebellum:7.94 brain stem:6.24 corpus callosum/glia:- pineal gland:- peripheral nerve:6.38 spine:- retina:- eye:5.95 artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:6.23 thymus:6.22 bone marrow:6.12 adipose:- bone:- skin:-
CAGE nodata
RNA-seq nodata
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:- prostate:- ovary:- testis:- heart:38.80 muscle:- esophagus:- stomach:- intestine:104.70 colon:-     liver/hepato:-        lung:-    bladder:- kidney:- pituitary:177.70 thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-
GeneChip uterus:- placenta:- prostate:- ovary:- testis:- heart:7.34 muscle:6.51 esophagus:- stomach:- intestine:8.77 colon:7.41 liver/hepato:- lung:- bladder:- kidney:6.65 pituitary:6.75 thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-
CAGE nodata
RNA-seq nodata

Gene Information

IDs

Refseq ID NM_053594
Gene ID 94202
Unigene ID Rn.6277
Probe set ID D64050_at  [RG_U34A]
Ensembl ID ENSRNOG00000004483

Orthologous Gene

Human[4]  NM_001207015, NM_001207016, NM_002849, NM_130846
Mouse[4]  NM_001161837, NM_001161838, NM_001161839, NM_001161840, NM_011217

Chromosomal Region

7q22  [55,324,246  -  55,612,942]

Gene Family (Interpro ID)

IPR008356  Protein-tyrosine phosphatase, KIM-containing
IPR016334  Protein-tyrosine phosphatase, receptor type R/non-receptor type 5
IPR000242  Protein-tyrosine phosphatase, receptor/non-receptor type

Link to Pubmed  (Pubmed ID)

7557444
7814416
12477932
12526090

Gene Ontology  (GO ID)

Biological Process

GO:0001701  in utero embryonic development
GO:0007399  nervous system development
GO:0030182  neuron differentiation
GO:0006470  protein amino acid dephosphorylation

Cellular Component

GO:0009986  cell surface
GO:0005737  cytoplasm
GO:0016021  integral to membrane
GO:0005730  nucleolus
GO:0005634  nucleus
GO:0005886  plasma membrane

Molecular Function

GO:0019901  protein kinase binding
GO:0004725  protein tyrosine phosphatase activity