SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4

同義遺伝子名

hSNF2b, Brahma protein homolog 1, SNF2L4, BRG1, BAF190, BRG-1 protein, SMARCA4, SNF2-BETA, Probable global transcription activator SNF2L4, SNF2-beta, SNF2LB, SNF2B, ATP-dependent helicase SMARCA4, Mitotic growth and transcription activator

正常組織・臓器 40分類
細胞株・初代培養細胞・成体組織・胎児組織 (FANTOM5 CAGE)

発現マップ on BodyParts3D

相対発現量を、人体 3D 画像にマップしたものです。Genechip 組織40分類の発現パターンを使用しています。

組織40分類別データ

脳

血

結

EST

大脳:133.90

小脳:113.30

脳幹:-

脳梁:233.30

松果体:-

末梢神経:153.40

脊柱:-

網膜:118.60

目:229.20

動脈:149.90

静脈:1266.30

リンパ節:323.50

末梢血:72.90

脾臓:94.50

胸腺:309.20

骨髄:98.40

脂肪:-

骨:51.20

皮膚:264

GeneChip

大脳:7.64

小脳:7.61

脳幹:7.66

脳梁:7.34

松果体:-

末梢神経:7.45

脊柱:7.37

網膜:-

目:-

動脈:7.25

静脈:7.27

リンパ節:7.48

末梢血:-

脾臓:7.34

胸腺:8.50

骨髄:7.37

脂肪:7.14

骨:-

皮膚:7.88

CAGE

大脳:3.61

小脳:-

脳幹:3.34

脳梁:3.59

松果体:4.05

末梢神経:-

脊柱:3.11

網膜:-

目:-

動脈:3.11

静脈:3.40

リンパ節:3.67

末梢血:-

脾臓:3.39

胸腺:4.69

骨髄:-

脂肪:2.96

骨:-

皮膚:-

RNA-seq

大脳:0.30

小脳:-

脳幹:-

脳梁:-

松果体:-

末梢神経:-

脊柱:-

網膜:-

目:-

動脈:-

静脈:-

リンパ節:0.42

末梢血:-

脾臓:-

胸腺:-

骨髄:-

脂肪:0.16

骨:-

皮膚:-

殖

筋

消

肝

肺

腎

泌

EST

子宮:45.60

胎盤:98.40

前立腺:101.40

卵巣:111.80

精巣:116.80

心臓:255.40

骨格筋:40.20

食道:-

胃:191.20

腸:32.40

結腸:152.60

肝臓:42.20

肺:146.60

膀胱:-

腎臓:124.80

下垂体:-

甲状腺:-

副腎:-

膵臓:53.30

乳腺:334.50

唾液腺:328.40

GeneChip

子宮:7.62

胎盤:7.62

前立腺:7.92

卵巣:7.69

精巣:8.75

心臓:6.80

骨格筋:6.78

食道:8.13

胃:7.20

腸:7.21

結腸:7.34

肝臓:6.71

肺:7.38

膀胱:-

腎臓:7.62

下垂体:7.41

甲状腺:7.52

副腎:7.23

膵臓:6.75

乳腺:7.79

唾液腺:7.17

CAGE

子宮:3.27

胎盤:3.38

前立腺:3.21

卵巣:3.44

精巣:3.85

心臓:3.09

骨格筋:3.25

食道:3.67

胃:-

腸:3.29

結腸:3.38

肝臓:2.97

肺:3.25

膀胱:3.14

腎臓:3.37

下垂体:3.17

甲状腺:2.88

副腎:-

膵臓:3.26

乳腺:2.83

唾液腺:3.13

RNA-seq

子宮:-

胎盤:-

前立腺:0.50

卵巣:0.20

精巣:0.00

心臓:0.00

骨格筋:0.00

食道:-

胃:-

腸:-

結腸:0.00

肝臓:0.01

肺:0.00

膀胱:-

腎臓:0.42

下垂体:-

甲状腺:0.57

副腎:0.21

膵臓:-

乳腺:0.00

唾液腺:-

IDs

Refseq ID	NM_001128845
Gene ID	6597
Unigene ID	Hs.327527
Probe set ID	214728_x_at [HG-U133_Plus_2]
Ensembl ID	ENSG00000127616
GTEx ID	ENSG00000127616

オーソログ対応遺伝子

マウス[2]	NM_001174078, NM_001174079, NM_011417
ラット[1]	NM_134368, NM_001174079, NM_011417

染色体

19p13.2 [11,071,598 - 11,172,958]

近くの遺伝子を探す
- -5kb から +5kb の範囲
- -10kb から +10kb の範囲

遺伝子ファミリー (Interpro ID)

IPR014001	DEAD-like helicase, N-terminal
IPR013999	HAS subgroup
IPR014021	Helicase, superfamily 1/2, ATP-binding domain
IPR014012	Helicase/SANT-associated, DNA binding
IPR006562	HSA

遺伝子オントロジー (GO ID)

Biological Process

GO:0001832	blastocyst growth
GO:0001835	blastocyst hatching
GO:0000902	cell morphogenesis
GO:0006338	chromatin remodeling
GO:0060318	definitive erythrocyte differentiation
GO:0010424	DNA methylation on cytosine within a CG sequence
GO:0035116	embryonic hindlimb morphogenesis
GO:0048562	embryonic organ morphogenesis
GO:0048730	epidermis morphogenesis
GO:0030198	extracellular matrix organization
GO:0030900	forebrain development
GO:0007403	glial cell fate determination
GO:0060347	heart trabecula formation
GO:0030902	hindbrain development
GO:0043966	histone H3 acetylation
GO:0030216	keratinocyte differentiation
GO:0001889	liver development
GO:0006346	methylation-dependent chromatin silencing
GO:0060766	negative regulation of androgen receptor signaling pathway
GO:0030308	negative regulation of cell growth
GO:0000122	negative regulation of transcription from RNA polymerase II promoter
GO:0007070	negative regulation of transcription from RNA polymerase II promoter, mitotic
GO:0045892	negative regulation of transcription, DNA-dependent
GO:0003407	neural retina development
GO:0006337	nucleosome disassembly
GO:0043923	positive regulation by host of viral transcription
GO:0043388	positive regulation of DNA binding
GO:0051091	positive regulation of transcription factor activity
GO:0045944	positive regulation of transcription from RNA polymerase II promoter
GO:0045893	positive regulation of transcription, DNA-dependent
GO:0006357	regulation of transcription from RNA polymerase II promoter
GO:0019827	stem cell maintenance
GO:0001570	vasculogenesis

Cellular Component

GO:0000792	heterochromatin
GO:0000790	nuclear chromatin
GO:0005719	nuclear euchromatin
GO:0005634	nucleus
GO:0005726	perichromatin fibrils
GO:0016514	SWI/SNF complex

Molecular Function

GO:0050681	androgen receptor binding
GO:0005524	ATP binding
GO:0003682	chromatin binding
GO:0008094	DNA-dependent ATPase activity
GO:0004386	helicase activity
GO:0070577	histone acetyl-lysine binding
GO:0002039	p53 binding
GO:0005515	protein binding
GO:0047485	protein N-terminus binding
GO:0030957	Tat protein binding
GO:0003713	transcription coactivator activity
GO:0003714	transcription corepressor activity

SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4

同義遺伝子名

発現データ

発現マップ on BodyParts3D

組織40分類別データ

詳細情報

IDs

オーソログ対応遺伝子

染色体

遺伝子ファミリー (Interpro ID)

Link to Pubmed (Pubmed ID)

遺伝子オントロジー (GO ID)

Biological Process

Cellular Component

Molecular Function