tripartite motif-containing 10

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Synonym

TRIM10, tripartite motif-containing 10, MGC141979, Tripartite motif-containing protein 10, RING finger protein 9, HERF1, RNF9, RFB30, B30-RING finger protein

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST nodata
GeneChip cerebrum:5.04 cerebellum:5.05 brain stem:5.04 corpus callosum/glia:4.95 pineal gland:- peripheral nerve:4.87 spine:4.88 retina:- eye:- artery/aorta:5 vein:5.04 lymphnode:5.10 peripheral blood:- spleen:4.94 thymus:4.88 bone marrow:6.45 adipose:4.92 bone:- skin:4.99
CAGE cerebrum:0 cerebellum:- brain stem:0 corpus callosum/glia:0 pineal gland:0 peripheral nerve:- spine:0 retina:- eye:- artery/aorta:0 vein:0 lymphnode:0 peripheral blood:- spleen:0.09 thymus:0.06 bone marrow:- adipose:0 bone:- skin:-
RNA-seq cerebrum:0 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:0 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:0.00 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST nodata
GeneChip uterus:4.88 placenta:4.82 prostate:4.92 ovary:4.89 testis:4.85 heart:5.01 muscle:5.06 esophagus:4.89 stomach:5.02 intestine:5 colon:5.10 liver/hepato:5.05 lung:4.95 bladder:- kidney:5.12 pituitary:5.04 thyroid/parathyroid:4.99 adrenal gland:5.19 pancreas:5.02 breast:4.88 salivary:5.01
CAGE uterus:0 placenta:0.54 prostate:0 ovary:0.07 testis:0.04 heart:0.13 muscle:0.05 esophagus:0 stomach:- intestine:0 colon:0     liver/hepato:0    lung:0.05 bladder:0 kidney:0 pituitary:0 thyroid/parathyroid:0 adrenal gland:- pancreas:0 breast:0 salivary:0
RNA-seq uterus:- placenta:- prostate:0 ovary:0 testis:0.06 heart:0 muscle:0 esophagus:- stomach:- intestine:- colon:0.04     liver/hepato:0.22        lung:0.56    bladder:- kidney:0.48 pituitary:- thyroid/parathyroid:0.01 adrenal gland:0.03 pancreas:- breast:0 salivary:-

Gene Information

IDs

Refseq ID NM_052828
Gene ID 10107
Unigene ID -
Probe set ID 210579_s_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000204613
GTEx ID ENSG00000204613

Orthologous Gene

Mouse[1]  NM_011280
Rat[1]  NM_001009176

Chromosomal Region

HSCHR6_MHC_APD  [30,056,560  -  30,065,548]
HSCHR6_MHC_MANN  [30,164,890  -  30,173,878]
HSCHR6_MHC_SSTO  [30,109,310  -  30,118,301]
6p22.1  [30,119,722  -  30,128,711]
HSCHR6_MHC_MCF  [30,198,208  -  30,207,199]
HSCHR6_MHC_DBB  [30,110,050  -  30,119,038]
HSCHR6_MHC_COX  [30,109,655  -  30,118,642]
HSCHR6_MHC_QBL  [30,109,273  -  30,118,261]

Gene Family (Interpro ID)

IPR001870  B302 (SPRY)-like
IPR003879  Butyrophylin-like
IPR003877  SPla/RYanodine receptor SPRY
IPR018355  SPla/RYanodine receptor subgroup
IPR000315  Zinc finger, B-box

Link to Pubmed  (Pubmed ID)

8304341
9271628
10207104
11006080
11331580
12477932
16702430
19851445
20041166
21143188
22939624

Gene Ontology  (GO ID)

Biological Process

GO:0008150  biological_process
GO:0030218  erythrocyte differentiation

Cellular Component

GO:0005737  cytoplasm

Molecular Function

GO:0003674  molecular_function
GO:0008270  zinc ion binding