SMYD family member 5

 jump to detail

Synonym

SET and MYND domain-containing protein 5, RRG1, Protein NN8-4AG, retinoic acid induced 15, SMYD5, SMYD family member 5, RAI15, NN8-4AG

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:29.60 cerebellum:- brain stem:- corpus callosum/glia:58.30 pineal gland:- peripheral nerve:- spine:- retina:- eye:52.90 artery/aorta:- vein:- lymphnode:50.60 peripheral blood:18.20 spleen:18.90 thymus:- bone marrow:19.70 adipose:- bone:25.60 skin:19.20
GeneChip cerebrum:6.34 cerebellum:6.27 brain stem:6.40 corpus callosum/glia:6.19 pineal gland:- peripheral nerve:6.24 spine:6.25 retina:- eye:- artery/aorta:6.24 vein:6.29 lymphnode:6.21 peripheral blood:- spleen:6.07 thymus:5.80 bone marrow:6.15 adipose:6.28 bone:- skin:6.14
CAGE cerebrum:2.57 cerebellum:- brain stem:2.51 corpus callosum/glia:2.77 pineal gland:2.39 peripheral nerve:- spine:2.33 retina:- eye:- artery/aorta:2.30 vein:2.62 lymphnode:2.59 peripheral blood:- spleen:2.31 thymus:1.96 bone marrow:- adipose:2.52 bone:- skin:-
RNA-seq cerebrum:2.71 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:2.86 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:2.55 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:9.10 placenta:72.90 prostate:11.30 ovary:37.30 testis:47.60 heart:- muscle:- esophagus:- stomach:- intestine:- colon:59.40     liver/hepato:-        lung:14.70    bladder:125.60 kidney:72.80 pituitary:- thyroid/parathyroid:163.70 adrenal gland:- pancreas:17.80 breast:18.60 salivary:-
GeneChip uterus:6.08 placenta:6.07 prostate:5.98 ovary:6.09 testis:6.40 heart:6.24 muscle:6.34 esophagus:6.06 stomach:6.15 intestine:6.32 colon:6.49 liver/hepato:6.13 lung:5.97 bladder:- kidney:6.34 pituitary:6.28 thyroid/parathyroid:6.01 adrenal gland:6.24 pancreas:6.87 breast:6.14 salivary:6.27
CAGE uterus:2.54 placenta:2.47 prostate:2.46 ovary:2.88 testis:2.66 heart:2.44 muscle:2.37 esophagus:2.64 stomach:- intestine:1.96 colon:2.28     liver/hepato:2.55    lung:2.16 bladder:2.28 kidney:2.53 pituitary:2.20 thyroid/parathyroid:2.52 adrenal gland:- pancreas:2.86 breast:2.79 salivary:2.31
RNA-seq uterus:- placenta:- prostate:3.55 ovary:3.74 testis:3.15 heart:2.28 muscle:2.03 esophagus:- stomach:- intestine:- colon:2.10     liver/hepato:2.33        lung:2.15    bladder:- kidney:3.04 pituitary:- thyroid/parathyroid:3.41 adrenal gland:3.69 pancreas:- breast:2.58 salivary:-

Gene Information

IDs

Refseq ID NM_006062
Gene ID 10322
Unigene ID Hs.631882
Probe set ID 209516_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000135632
GTEx ID ENSG00000135632

Orthologous Gene

Mouse[2]  NM_144918
Rat[1]  NM_001107870

Chromosomal Region

2p13.2  [73,441,350  -  73,454,365]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

8754834
12477932
15489334
21139048
21906983
24816145

Gene Ontology  (GO ID)

Biological Process

GO:0008150  biological_process

Cellular Component

GO:0005575  cellular_component

Molecular Function

GO:0046872  metal ion binding
GO:0008168  methyltransferase activity
GO:0003674  molecular_function