non imprinted in Prader-Willi/Angelman syndrome 1

Synonym

SPG6, NIPA1, spastic paraplegia 6 (autosomal dominant), non imprinted in Prader-Willi/Angelman syndrome 1, FSP3, MGC35570, MGC102724

normal 40 tissues
cell lines, primary cells, adult tissues and fetal tissues (FANTOM5 CAGE)

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain

blood

connective

EST

cerebrum:79.40

cerebellum:63

brain stem:-

corpus callosum/glia:87.50

pineal gland:-

peripheral nerve:-

spine:-

retina:-

eye:29.40

artery/aorta:60

vein:-

lymphnode:20.20

peripheral blood:36.40

spleen:75.60

thymus:64.40

bone marrow:-

adipose:-

bone:-

skin:24

GeneChip

nodata

CAGE

cerebrum:3.14

cerebellum:-

brain stem:3.97

corpus callosum/glia:3.78

pineal gland:2.05

peripheral nerve:-

spine:3.53

retina:-

eye:-

artery/aorta:2.12

vein:1.76

lymphnode:1.72

peripheral blood:-

spleen:1.67

thymus:1.79

bone marrow:-

adipose:1.60

bone:-

skin:-

RNA-seq

cerebrum:1.89

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:-

retina:-

eye:-

artery/aorta:-

vein:-

lymphnode:1.74

peripheral blood:-

spleen:-

thymus:-

bone marrow:-

adipose:0.31

bone:-

skin:-

reproductive

muscular

alimentary

liver

lung

urinary

endo/exo-crine

EST

uterus:-

placenta:18.20

prostate:11.30

ovary:-

testis:8.70

heart:25.50

muscle:-

esophagus:-

stomach:-

intestine:-

colon:-

liver/hepato:21.10

lung:19.60

bladder:-

kidney:-

pituitary:-

thyroid/parathyroid:-

adrenal gland:50.80

pancreas:8.90

breast:27.90

salivary:-

GeneChip

nodata

CAGE

uterus:1.37

placenta:1.45

prostate:1.42

ovary:1.06

testis:1.40

heart:1.59

muscle:1.08

esophagus:1.70

stomach:-

intestine:2.17

colon:2.19

liver/hepato:2.07

lung:1.82

bladder:1.62

kidney:2.22

pituitary:1.71

thyroid/parathyroid:1.93

adrenal gland:-

pancreas:2.41

breast:0.55

salivary:1.82

RNA-seq

uterus:-

placenta:-

prostate:0.38

ovary:0.32

testis:1.20

heart:0.21

muscle:0.53

esophagus:-

stomach:-

intestine:-

colon:0.79

liver/hepato:0.19

lung:0.83

bladder:-

kidney:1.26

pituitary:-

thyroid/parathyroid:1.03

adrenal gland:0.42

pancreas:-

breast:0.59

salivary:-

IDs

Refseq ID	NM_144599
Gene ID	123606
Unigene ID	Hs.511797
Probe set ID	-
Ensembl ID	ENSG00000170113
GTEx ID	ENSG00000170113

Orthologous Gene

Mouse[2]	NM_153578
Rat [0]

Chromosomal Region

15q11.2 [23,043,277 - 23,086,843]

Search genes near this gene
- Between -5kb and +5kb
- Between -10kb and +10kb

Gene Family (Interpro ID)

Gene Ontology (GO ID)

Biological Process

GO:0008219

cell death

Cellular Component

GO:0005769	early endosome
GO:0016021	integral to membrane
GO:0005886	plasma membrane

Molecular Function

GO:0015095

magnesium ion transmembrane transporter activity

non imprinted in Prader-Willi/Angelman syndrome 1

Synonym

Expression Pattern

Choropleth map on BodyParts3D

Classification in 40 Organs

Gene Information

IDs

Orthologous Gene

Chromosomal Region

Gene Family (Interpro ID)

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

Cellular Component

Molecular Function