U2 small nuclear RNA auxiliary factor 1-like 4

Synonym

U2 small nuclear RNA auxiliary factor 1-like 3, U2AF1L3V1, U2AF1L3, U2AF1L4, U2 small nuclear RNA auxiliary factor 1-like 4, FLJ35525, MGC33901, U2af26, U2AF1RS3, U2AF1-RS3

normal 40 tissues
cell lines, primary cells, adult tissues and fetal tissues (FANTOM5 CAGE)

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain

blood

connective

EST

cerebrum:16.60

cerebellum:25.20

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:-

retina:-

eye:29.40

artery/aorta:-

vein:-

lymphnode:80.90

peripheral blood:54.70

spleen:75.60

thymus:64.40

bone marrow:59

adipose:-

bone:25.60

skin:24

GeneChip

nodata

CAGE

cerebrum:0.52

cerebellum:-

brain stem:0.64

corpus callosum/glia:0.73

pineal gland:0.21

peripheral nerve:-

spine:0.40

retina:-

eye:-

artery/aorta:0.47

vein:2.20

lymphnode:2.63

peripheral blood:-

spleen:2.48

thymus:1.91

bone marrow:-

adipose:0.71

bone:-

skin:-

RNA-seq

cerebrum:2.92

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:-

retina:-

eye:-

artery/aorta:-

vein:-

lymphnode:2.92

peripheral blood:-

spleen:-

thymus:-

bone marrow:-

adipose:1.94

bone:-

skin:-

reproductive

muscular

alimentary

liver

lung

urinary

endo/exo-crine

EST

uterus:-

placenta:14.60

prostate:22.50

ovary:37.30

testis:17.30

heart:25.50

muscle:-

esophagus:-

stomach:-

intestine:-

colon:8.50

liver/hepato:-

lung:34.20

bladder:-

kidney:62.40

pituitary:-

thyroid/parathyroid:-

adrenal gland:-

pancreas:44.50

breast:18.60

salivary:-

GeneChip

nodata

CAGE

uterus:0.66

placenta:0.43

prostate:0.49

ovary:0.60

testis:0.58

heart:0.32

muscle:0.75

esophagus:0.82

stomach:-

intestine:1.27

colon:0.82

liver/hepato:1.12

lung:1.25

bladder:0.91

kidney:1.40

pituitary:0.84

thyroid/parathyroid:0.64

adrenal gland:-

pancreas:0.58

breast:0.55

salivary:0.83

RNA-seq

uterus:-

placenta:-

prostate:3.03

ovary:3.22

testis:3.37

heart:1.91

muscle:0.87

esophagus:-

stomach:-

intestine:-

colon:2.26

liver/hepato:1.83

lung:2.80

bladder:-

kidney:3.08

pituitary:-

thyroid/parathyroid:4.20

adrenal gland:3.76

pancreas:-

breast:2.68

salivary:-

IDs

Refseq ID	NM_144987
Gene ID	199746
Unigene ID	Hs.351558
Probe set ID	-
Ensembl ID	ENSG00000161265
GTEx ID	ENSG00000161265

Orthologous Gene

Mouse[2]	NM_170760
Rat[1]	NM_001008775

Chromosomal Region

19q13.12 [36,233,430 - 36,236,336]

Search genes near this gene
- Between -5kb and +5kb
- Between -10kb and +10kb

Gene Family (Interpro ID)

IPR000504	RNA recognition motif, RNP-1
IPR003954	RNA recognition, domain 1

Gene Ontology (GO ID)

Biological Process

GO:0006397	mRNA processing
GO:0008380	RNA splicing

Cellular Component

GO:0016607	nuclear speck
GO:0005681	spliceosomal complex

Molecular Function

GO:0046872	metal ion binding
GO:0000166	nucleotide binding
GO:0003723	RNA binding

U2 small nuclear RNA auxiliary factor 1-like 4

Synonym

Expression Pattern

Choropleth map on BodyParts3D

Classification in 40 Organs

Gene Information

IDs

Orthologous Gene

Chromosomal Region

Gene Family (Interpro ID)

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

Cellular Component

Molecular Function