splicing factor 3b, subunit 3, 130kDa

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Synonym

Spliceosome-associated protein 130, RSE1, SF3B3, SAP130, SAP 130, Splicing factor 3B subunit 3, STAF130, splicing factor 3b, subunit 3, 130kDa, KIAA0017, SF3b130, Pre-mRNA-splicing factor SF3b 130 kDa subunit

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:194.40 cerebellum:302.30 brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:61.30 spine:224.60 retina:118.60 eye:105.80 artery/aorta:119.90 vein:533.20 lymphnode:192.10 peripheral blood:109.30 spleen:189.10 thymus:296.30 bone marrow:59 adipose:121 bone:102.40 skin:144
GeneChip cerebrum:6.63 cerebellum:7.01 brain stem:6.60 corpus callosum/glia:6.80 pineal gland:- peripheral nerve:6.89 spine:6.67 retina:- eye:- artery/aorta:6.92 vein:6.91 lymphnode:7.39 peripheral blood:- spleen:7.19 thymus:7.31 bone marrow:7.45 adipose:7.10 bone:- skin:7.35
CAGE cerebrum:4.44 cerebellum:- brain stem:4.36 corpus callosum/glia:4.56 pineal gland:4.69 peripheral nerve:- spine:4.43 retina:- eye:- artery/aorta:4.17 vein:4.50 lymphnode:4.86 peripheral blood:- spleen:4.53 thymus:5.14 bone marrow:- adipose:4.70 bone:- skin:-
RNA-seq cerebrum:3.19 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:3.70 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:3.59 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:273.40 placenta:94.70 prostate:67.60 ovary:149.10 testis:190.40 heart:114.90 muscle:80.40 esophagus:- stomach:42.50 intestine:32.40 colon:245.90     liver/hepato:126.70        lung:161.30    bladder:125.60 kidney:62.40 pituitary:116 thyroid/parathyroid:- adrenal gland:50.80 pancreas:26.70 breast:232.30 salivary:328.40
GeneChip uterus:7.22 placenta:7.12 prostate:7.03 ovary:7.47 testis:6.96 heart:7.01 muscle:6.74 esophagus:8.07 stomach:6.86 intestine:6.79 colon:7.16 liver/hepato:6.75 lung:6.84 bladder:- kidney:6.88 pituitary:7.19 thyroid/parathyroid:7.27 adrenal gland:6.92 pancreas:6.74 breast:7.34 salivary:6.93
CAGE uterus:4.74 placenta:4.40 prostate:4.48 ovary:4.94 testis:4.42 heart:4.25 muscle:4.07 esophagus:4.58 stomach:- intestine:4.18 colon:4.31     liver/hepato:4.28    lung:4.26 bladder:4.59 kidney:4.30 pituitary:4.81 thyroid/parathyroid:4.63 adrenal gland:- pancreas:4.49 breast:4.25 salivary:4.45
RNA-seq uterus:- placenta:- prostate:3.68 ovary:4.39 testis:3.59 heart:2.94 muscle:4.13 esophagus:- stomach:- intestine:- colon:3.50     liver/hepato:2.51        lung:3.35    bladder:- kidney:3.27 pituitary:- thyroid/parathyroid:4.02 adrenal gland:3.72 pancreas:- breast:3.07 salivary:-

Gene Information

IDs

Refseq ID NM_012426
Gene ID 23450
Unigene ID Hs.514435
Probe set ID 200687_s_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000189091
GTEx ID ENSG00000189091

Orthologous Gene

Mouse[1]  NM_133953
Rat [0]  

Chromosomal Region

16q22.1  [70,557,691  -  70,608,820]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

7584026
7584028
8889548
10428969
10490618
11013263
11406595
11438666
11500380
11564863
11991638
12029088
12226669
12234937
12477932
12601814
12938929
14559993
14702039
15146077
15324660
15489334
15848144
16055720
16159877
16169070
16196087
17332742
17353931
17620599
17643375
18274552
18781797
19019082
19454010
20360068
20379614
20946988
20972266
21081666
21139048
21145461
21319273
21549307
21642987
21890473
21900206
21906983
21963094
21988832
22053931
22178446
22268729
22365833
22751105
22939624
22939629
23000965
23084401
23463506
23951410
23974796
24332808
24457600
24583282
24591637
24639526
24654937
24816145

Gene Ontology  (GO ID)

Biological Process

GO:0010467  gene expression
GO:0006397  mRNA processing
GO:0000398  nuclear mRNA splicing, via spliceosome
GO:0006461  protein complex assembly
GO:0008380  RNA splicing
GO:0000375  RNA splicing, via transesterification reactions

Cellular Component

GO:0071013  catalytic step 2 spliceosome
GO:0005654  nucleoplasm
GO:0030532  small nuclear ribonucleoprotein complex
GO:0005681  spliceosomal complex
GO:0005689  U12-type spliceosomal complex

Molecular Function

GO:0003676  nucleic acid binding