apolipoprotein L, 2

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Synonym

Apolipoprotein-L2, Apolipoprotein L-II, apolipoprotein L, 2, APOL2, APOL-II, ApoL-II

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:67.60 cerebellum:75.60 brain stem:- corpus callosum/glia:116.60 pineal gland:- peripheral nerve:- spine:- retina:- eye:11.80 artery/aorta:119.90 vein:66.60 lymphnode:20.20 peripheral blood:236.80 spleen:208 thymus:322.10 bone marrow:19.70 adipose:80.70 bone:191.90 skin:72
GeneChip cerebrum:6.47 cerebellum:6.73 brain stem:6.94 corpus callosum/glia:6.24 pineal gland:- peripheral nerve:6.85 spine:6.37 retina:- eye:- artery/aorta:6.71 vein:6.96 lymphnode:6.73 peripheral blood:- spleen:6.89 thymus:6.62 bone marrow:6.44 adipose:6.57 bone:- skin:6.50
CAGE cerebrum:3.07 cerebellum:- brain stem:3.27 corpus callosum/glia:2.86 pineal gland:2.86 peripheral nerve:- spine:3.44 retina:- eye:- artery/aorta:3.22 vein:3.09 lymphnode:2.93 peripheral blood:- spleen:3.15 thymus:2.93 bone marrow:- adipose:3.46 bone:- skin:-
RNA-seq cerebrum:4.55 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:3.96 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:4.26 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:100.20 placenta:61.90 prostate:90.10 ovary:- testis:- heart:63.90 muscle:20.10 esophagus:342.80 stomach:63.70 intestine:97.20 colon:93.30     liver/hepato:31.70        lung:88    bladder:251.20 kidney:20.80 pituitary:- thyroid/parathyroid:- adrenal gland:152.40 pancreas:53.30 breast:46.50 salivary:656.80
GeneChip uterus:6.74 placenta:6.34 prostate:6.54 ovary:6.63 testis:5.34 heart:6.83 muscle:6.30 esophagus:6.19 stomach:6.60 intestine:6.64 colon:6.68 liver/hepato:7.06 lung:7.01 bladder:- kidney:6.34 pituitary:6.60 thyroid/parathyroid:6.06 adrenal gland:6.46 pancreas:6.31 breast:6.41 salivary:6.30
CAGE uterus:3.13 placenta:2.99 prostate:2.91 ovary:2.79 testis:2.47 heart:3.37 muscle:3.11 esophagus:2.74 stomach:- intestine:3.44 colon:2.95     liver/hepato:3.55    lung:3.45 bladder:3.21 kidney:3.21 pituitary:4.32 thyroid/parathyroid:3.47 adrenal gland:- pancreas:2.66 breast:3.22 salivary:3.05
RNA-seq uterus:- placenta:- prostate:4.02 ovary:3.93 testis:3.34 heart:3.61 muscle:3.17 esophagus:- stomach:- intestine:- colon:3.48     liver/hepato:3.76        lung:5.24    bladder:- kidney:4.24 pituitary:- thyroid/parathyroid:3.85 adrenal gland:4.11 pancreas:- breast:4.14 salivary:-

Gene Information

IDs

Refseq ID NM_030882
Gene ID 23780
Unigene ID Hs.474740
Probe set ID 221653_x_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000128335
GTEx ID ENSG00000128335

Orthologous Gene

Mouse[7]  NM_177820, NM_177744, NM_001162883, NM_001168660, NM_173743, NM_173786, NM_001177533, NM_001143686
Rat[1]  NM_001025066, NM_001013175, NM_001162883, NM_001168660, NM_173743, NM_173786, NM_001177533, NM_001143686

Chromosomal Region

22q12.3  [36,622,256  -  36,636,000]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

7566098
10591208
11290834
11374903
11944986
12477932
14702039
15107424
15489334
15949655
18632255
19946888
20602615
20665705
21890473
21906983
21987572
22505724
23000965

Gene Ontology  (GO ID)

Biological Process

GO:0006953  acute-phase response
GO:0008203  cholesterol metabolic process
GO:0006629  lipid metabolic process
GO:0006869  lipid transport
GO:0042157  lipoprotein metabolic process
GO:0060135  maternal process involved in female pregnancy
GO:0007275  multicellular organismal development

Cellular Component

GO:0005789  endoplasmic reticulum membrane
GO:0005576  extracellular region

Molecular Function

GO:0008035  high-density lipoprotein binding
GO:0008289  lipid binding
GO:0005102  receptor binding