leiomodin 1 (smooth muscle)

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Synonym

Leiomodin-1, Thyroid-associated ophthalmopathy autoantigen, SM-Lmod, 64 kDa autoantigen 1D3, 64 kDa autoantigen D1, D1, 64 kDa autoantigen 1D, SM-LMOD, leiomodin 1 (smooth muscle), Smooth muscle leiomodin, 64kD, 1D, LMOD1, Leiomodin, muscle form

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:34.40 cerebellum:25.20 brain stem:- corpus callosum/glia:87.50 pineal gland:- peripheral nerve:153.40 spine:224.60 retina:118.60 eye:64.60 artery/aorta:- vein:66.60 lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:19.70 adipose:161.30 bone:51.20 skin:67.20
GeneChip cerebrum:5.15 cerebellum:5.22 brain stem:5.31 corpus callosum/glia:5.19 pineal gland:- peripheral nerve:6.76 spine:5.37 retina:- eye:- artery/aorta:10.40 vein:10.20 lymphnode:6.24 peripheral blood:- spleen:5.96 thymus:4.75 bone marrow:5 adipose:7.76 bone:- skin:7.26
CAGE cerebrum:2.46 cerebellum:- brain stem:2.58 corpus callosum/glia:2.69 pineal gland:6.39 peripheral nerve:- spine:2.61 retina:- eye:- artery/aorta:7.08 vein:5.01 lymphnode:3.35 peripheral blood:- spleen:3.83 thymus:0.37 bone marrow:- adipose:5.10 bone:- skin:-
RNA-seq cerebrum:3.03 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:5.33 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:6.43 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:966 placenta:120.20 prostate:371.70 ovary:37.30 testis:86.50 heart:38.30 muscle:140.60 esophagus:- stomach:106.20 intestine:453.60 colon:93.30     liver/hepato:10.60        lung:171.10    bladder:- kidney:31.20 pituitary:- thyroid/parathyroid:327.50 adrenal gland:50.80 pancreas:44.50 breast:18.60 salivary:-
GeneChip uterus:8.79 placenta:6.99 prostate:8.73 ovary:8.26 testis:6.43 heart:6.78 muscle:7.84 esophagus:7.29 stomach:8.83 intestine:8.11 colon:8.78 liver/hepato:4.82 lung:7.15 bladder:- kidney:5.58 pituitary:5.40 thyroid/parathyroid:7.34 adrenal gland:7.87 pancreas:5.34 breast:8.42 salivary:6.98
CAGE uterus:6.40 placenta:4.23 prostate:6.39 ovary:5.62 testis:4.87 heart:4.33 muscle:4.41 esophagus:6.52 stomach:- intestine:4.96 colon:5.84     liver/hepato:2.05    lung:4.30 bladder:7.09 kidney:3.62 pituitary:2.18 thyroid/parathyroid:4.00 adrenal gland:- pancreas:1.42 breast:5.08 salivary:4.14
RNA-seq uterus:- placenta:- prostate:8.09 ovary:5.46 testis:6.42 heart:3.09 muscle:4.69 esophagus:- stomach:- intestine:- colon:7.41     liver/hepato:0.90        lung:4.99    bladder:- kidney:2.94 pituitary:- thyroid/parathyroid:5.01 adrenal gland:5.96 pancreas:- breast:4.28 salivary:-

Gene Information

IDs

Refseq ID NM_012134
Gene ID 25802
Unigene ID Hs.519075
Probe set ID 203766_s_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000163431
GTEx ID ENSG00000163431

Orthologous Gene

Mouse[1]  NM_053106
Rat[1]  NM_001107179

Chromosomal Region

1q32.1  [201,865,580  -  201,915,716]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

2026759
8811043
10520227
11318603
11350761
12477932
14627618
16344560
16633140
18029348
18676680
19170196
19625176
19692168
19913121
20628086
22157009
22747683

Gene Ontology  (GO ID)

Biological Process

GO:0006936  muscle contraction

Cellular Component

GO:0005737  cytoplasm
GO:0005856  cytoskeleton
GO:0005829  cytosol
GO:0016020  membrane

Molecular Function

GO:0003779  actin binding
GO:0005523  tropomyosin binding