tetraspanin 17

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Synonym

Tetraspanin-17, FBX23, Tspan-17, tetraspanin 17, TSPAN17, MGC14859, F-box only protein 23, Transmembrane 4 superfamily member 17, FBXO23, TM4SF17, MGC71255, Tetraspan protein SB134

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:22.50 cerebellum:12.60 brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:30.70 spine:- retina:- eye:94 artery/aorta:- vein:- lymphnode:20.20 peripheral blood:36.40 spleen:- thymus:25.80 bone marrow:39.40 adipose:- bone:12.80 skin:91.20
GeneChip nodata
CAGE cerebrum:2.65 cerebellum:- brain stem:2.19 corpus callosum/glia:2.11 pineal gland:3.21 peripheral nerve:- spine:2.22 retina:- eye:- artery/aorta:2.39 vein:2.44 lymphnode:2.89 peripheral blood:- spleen:2.57 thymus:1.38 bone marrow:- adipose:2.15 bone:- skin:-
RNA-seq cerebrum:0.00 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:0.00 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:0.00 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:9.10 placenta:7.30 prostate:11.30 ovary:37.30 testis:21.60 heart:- muscle:20.10 esophagus:- stomach:21.20 intestine:- colon:17     liver/hepato:-        lung:44    bladder:- kidney:41.60 pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:8.90 breast:46.50 salivary:-
GeneChip nodata
CAGE uterus:2.17 placenta:2.21 prostate:2.28 ovary:2.12 testis:3.02 heart:2.80 muscle:2.77 esophagus:2.44 stomach:- intestine:2.66 colon:2.81     liver/hepato:2.55    lung:2.51 bladder:2.14 kidney:2.76 pituitary:2.91 thyroid/parathyroid:2.50 adrenal gland:- pancreas:3.32 breast:2.69 salivary:2.46
RNA-seq uterus:- placenta:- prostate:0.00 ovary:0.00 testis:0.00 heart:0.21 muscle:0.00 esophagus:- stomach:- intestine:- colon:0.00     liver/hepato:0.00        lung:0.00    bladder:- kidney:0.00 pituitary:- thyroid/parathyroid:0.63 adrenal gland:0.00 pancreas:- breast:0.00 salivary:-

Gene Information

IDs

Refseq ID NM_012171
Gene ID 26262
Unigene ID Hs.532129
Probe set ID -
Ensembl ID ENSG00000048140
GTEx ID ENSG00000048140

Orthologous Gene

Mouse[2]  NM_028841
Rat[2]  NM_028841

Chromosomal Region

5q35.2  [176,074,388  -  176,086,058]

Gene Family (Interpro ID)

IPR018499  Tetraspanin
IPR000301  Tetraspanin, subgroup

Link to Pubmed  (Pubmed ID)

10531035
10531037
11214971
12477932
14702039
17207965
17353931

Gene Ontology  (GO ID)

Biological Process

GO:0016567  protein ubiquitination

Cellular Component

GO:0016021  integral to membrane
GO:0000151  ubiquitin ligase complex

Molecular Function

GO:0004842  ubiquitin-protein ligase activity