heterogeneous nuclear ribonucleoprotein C (C1/C2)

Synonym

Heterogeneous nuclear ribonucleoproteins C1/C2, HNRPC, hnRNP C1 / hnRNP C2, MGC131677, MGC105117, MGC104306, MGC117353, SNRPC, hnRNPC, HNRNP, heterogeneous nuclear ribonucleoprotein C (C1/C2)

normal 40 tissues
cell lines, primary cells, adult tissues and fetal tissues (FANTOM5 CAGE)

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain

blood

connective

EST

cerebrum:359.10

cerebellum:314.80

brain stem:-

corpus callosum/glia:145.80

pineal gland:148.30

peripheral nerve:521.40

spine:561.50

retina:711.80

eye:241

artery/aorta:239.80

vein:533.20

lymphnode:374.10

peripheral blood:236.80

spleen:302.50

thymus:386.50

bone marrow:472.30

adipose:322.70

bone:204.70

skin:504

GeneChip

cerebrum:8.55

cerebellum:8.44

brain stem:8.69

corpus callosum/glia:8.93

pineal gland:-

peripheral nerve:8.56

spine:8.73

retina:-

eye:-

artery/aorta:8.55

vein:8.74

lymphnode:9.05

peripheral blood:-

spleen:9.21

thymus:10

bone marrow:8.87

adipose:8.68

bone:-

skin:8.49

CAGE

cerebrum:2.75

cerebellum:-

brain stem:2.75

corpus callosum/glia:2.74

pineal gland:2.62

peripheral nerve:-

spine:2.72

retina:-

eye:-

artery/aorta:2.79

vein:2.66

lymphnode:3.04

peripheral blood:-

spleen:2.90

thymus:2.66

bone marrow:-

adipose:2.43

bone:-

skin:-

RNA-seq

cerebrum:4.19

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:-

retina:-

eye:-

artery/aorta:-

vein:-

lymphnode:5.51

peripheral blood:-

spleen:-

thymus:-

bone marrow:-

adipose:4.13

bone:-

skin:-

reproductive

muscular

alimentary

liver

lung

urinary

endo/exo-crine

EST

uterus:291.60

placenta:357

prostate:214

ovary:633.50

testis:190.40

heart:459.80

muscle:80.40

esophagus:1371.30

stomach:382.40

intestine:356.40

colon:1068.40

liver/hepato:158.30

lung:317.70

bladder:376.80

kidney:280.70

pituitary:347.90

thyroid/parathyroid:-

adrenal gland:507.90

pancreas:346.80

breast:576.20

salivary:656.80

GeneChip

uterus:9.28

placenta:8.94

prostate:9.24

ovary:9.50

testis:8.81

heart:8.59

muscle:8.21

esophagus:8.73

stomach:8.77

intestine:8.82

colon:8.92

liver/hepato:8.51

lung:8.85

bladder:-

kidney:8.96

pituitary:8.84

thyroid/parathyroid:8.83

adrenal gland:8.93

pancreas:8.74

breast:8.86

salivary:8.70

CAGE

uterus:2.70

placenta:2.22

prostate:2.70

ovary:2.75

testis:3.26

heart:2.51

muscle:2.32

esophagus:2.41

stomach:-

intestine:2.60

colon:2.73

liver/hepato:2.15

lung:2.80

bladder:2.61

kidney:2.40

pituitary:2.82

thyroid/parathyroid:2.82

adrenal gland:-

pancreas:2.71

breast:2.79

salivary:2.31

RNA-seq

uterus:-

placenta:-

prostate:5.05

ovary:5.35

testis:4.99

heart:2.75

muscle:3.75

esophagus:-

stomach:-

intestine:-

colon:5.68

liver/hepato:3.91

lung:5.78

bladder:-

kidney:4.93

pituitary:-

thyroid/parathyroid:4.27

adrenal gland:4.86

pancreas:-

breast:4.17

salivary:-

IDs

Refseq ID	NM_004500
Gene ID	3183
Unigene ID	Hs.508848
Probe set ID	212626_x_at [HG-U133_Plus_2]
Ensembl ID	ENSG00000092199
GTEx ID	ENSG00000092199

Orthologous Gene

Mouse [0]
Rat [0]

Chromosomal Region

14q11.2 [21,677,295 - 21,737,653]

Search genes near this gene
- Between -5kb and +5kb
- Between -10kb and +10kb

Gene Family (Interpro ID)

IPR000504

RNA recognition motif, RNP-1

Gene Ontology (GO ID)

Biological Process

GO:0010467	gene expression
GO:0000398	nuclear mRNA splicing, via spliceosome
GO:0008380	RNA splicing

Cellular Component

GO:0071013	catalytic step 2 spliceosome
GO:0005654	nucleoplasm
GO:0045120	pronucleus
GO:0005681	spliceosomal complex

Molecular Function

GO:0042802	identical protein binding
GO:0003729	mRNA binding
GO:0000166	nucleotide binding
GO:0005515	protein binding
GO:0003723	RNA binding

heterogeneous nuclear ribonucleoprotein C (C1/C2)

Synonym

Expression Pattern

Choropleth map on BodyParts3D

Classification in 40 Organs

Gene Information

IDs

Orthologous Gene

Chromosomal Region

Gene Family (Interpro ID)

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

Cellular Component

Molecular Function