interferon, alpha 16

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Synonym

Interferon alpha-WA, Interferon alpha-16 precursor, IFNA16, interferon, alpha 16

normal 40 tissues
cell lines, primary cells, adult tissues and fetal tissues (FANTOM5 CAGE)

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain

blood

connective

EST

cerebrum:-

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:-

retina:-

eye:-

artery/aorta:-

vein:-

lymphnode:-

peripheral blood:-

spleen:-

thymus:-

bone marrow:-

adipose:-

bone:-

skin:-

GeneChip

cerebrum:3.97

cerebellum:4.15

brain stem:4.02

corpus callosum/glia:4

pineal gland:-

peripheral nerve:3.98

spine:4.04

retina:-

eye:-

artery/aorta:4

vein:4.14

lymphnode:3.76

peripheral blood:-

spleen:3.91

thymus:4.11

bone marrow:4.29

adipose:3.91

bone:-

skin:3.99

CAGE

nodata

RNA-seq

cerebrum:0.08

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:-

retina:-

eye:-

artery/aorta:-

vein:-

lymphnode:0.02

peripheral blood:-

spleen:-

thymus:-

bone marrow:-

adipose:0

bone:-

skin:-

reproductive

muscular

alimentary

liver

lung

urinary

endo/exo-crine

EST

uterus:-

placenta:-

prostate:-

ovary:-

testis:-

heart:-

muscle:-

esophagus:-

stomach:-

intestine:-

colon:-

liver/hepato:-

lung:-

bladder:-

kidney:-

pituitary:-

thyroid/parathyroid:-

adrenal gland:-

pancreas:-

breast:-

salivary:-

GeneChip

uterus:3.85

placenta:3.59

prostate:3.74

ovary:3.67

testis:3.74

heart:4.26

muscle:4.26

esophagus:3.81

stomach:4.02

intestine:3.90

colon:3.98

liver/hepato:3.80

lung:3.78

bladder:-

kidney:4.07

pituitary:4.09

thyroid/parathyroid:3.79

adrenal gland:3.94

pancreas:4.26

breast:3.74

salivary:3.86

CAGE

nodata

RNA-seq

uterus:-

placenta:-

prostate:0

ovary:0

testis:0

heart:0

muscle:0

esophagus:-

stomach:-

intestine:-

colon:0

liver/hepato:0

lung:0

bladder:-

kidney:0

pituitary:-

thyroid/parathyroid:0

adrenal gland:0

pancreas:-

breast:0

salivary:-

IDs

Refseq ID	NM_002173
Gene ID	3449
Unigene ID	Hs.56303
Probe set ID	208182_x_at [HG-U133_Plus_2]
Ensembl ID	ENSG00000147885
GTEx ID	ENSG00000147885

Orthologous Gene

Mouse[11]	NM_177347, NM_010502, NM_010504, NM_008333, NM_008334, NM_177361, NM_206870, NM_010505, NM_008336, NM_010503, NM_206867, NM_206871, NM_010507, NM_206975
Rat[1]	NM_001014786, NM_001106667, NM_010504, NM_008333, NM_008334, NM_177361, NM_206870, NM_010505, NM_008336, NM_010503, NM_206867, NM_206871, NM_010507, NM_206975

Chromosomal Region

9p21.3 [21,216,372 - 21,217,310]

Search genes near this gene
- Between -5kb and +5kb
- Between -10kb and +10kb

Gene Family (Interpro ID)

IPR009079	Four-helical cytokine-like, core
IPR000471	Interferon alpha/beta/delta

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

GO:0007596	blood coagulation
GO:0019221	cytokine-mediated signaling pathway
GO:0051607	defense response to virus
GO:0045087	innate immune response
GO:0060338	regulation of type I interferon-mediated signaling pathway
GO:0060337	type I interferon-mediated signaling pathway

Cellular Component

GO:0005576	extracellular region
GO:0005615	extracellular space

Molecular Function

GO:0005125	cytokine activity
GO:0005132	interferon-alpha/beta receptor binding

interferon, alpha 16

Synonym

Expression Pattern

Choropleth map on BodyParts3D

Classification in 40 Organs

Gene Information

IDs

Orthologous Gene

Chromosomal Region

Gene Family (Interpro ID)

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

Cellular Component

Molecular Function