integrin, alpha 6

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Synonym

VLA-6, CD49f antigen, ITGA6B, ITGA6, CD49f, Integrin alpha-6 precursor, integrin, alpha 6

normal 40 tissues
cell lines, primary cells, adult tissues and fetal tissues (FANTOM5 CAGE)

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain

blood

connective

EST

cerebrum:45

cerebellum:12.60

brain stem:-

corpus callosum/glia:87.50

pineal gland:-

peripheral nerve:214.70

spine:112.30

retina:-

eye:58.80

artery/aorta:179.90

vein:199.90

lymphnode:50.60

peripheral blood:-

spleen:75.60

thymus:64.40

bone marrow:-

adipose:-

bone:25.60

skin:105.60

GeneChip

cerebrum:5.73

cerebellum:4.39

brain stem:5.69

corpus callosum/glia:6.16

pineal gland:-

peripheral nerve:8.94

spine:6.64

retina:-

eye:-

artery/aorta:6.93

vein:6.54

lymphnode:6.73

peripheral blood:-

spleen:7.64

thymus:7.60

bone marrow:6.10

adipose:7.50

bone:-

skin:7.37

CAGE

cerebrum:3.21

cerebellum:-

brain stem:3.37

corpus callosum/glia:3.54

pineal gland:2.52

peripheral nerve:-

spine:3.48

retina:-

eye:-

artery/aorta:3.46

vein:4.20

lymphnode:3.86

peripheral blood:-

spleen:3.86

thymus:3.78

bone marrow:-

adipose:4.58

bone:-

skin:-

RNA-seq

cerebrum:3.31

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:-

retina:-

eye:-

artery/aorta:-

vein:-

lymphnode:3.16

peripheral blood:-

spleen:-

thymus:-

bone marrow:-

adipose:5.25

bone:-

skin:-

reproductive

muscular

alimentary

liver

lung

urinary

endo/exo-crine

EST

uterus:264.30

placenta:287.80

prostate:225.30

ovary:298.10

testis:134.10

heart:63.90

muscle:20.10

esophagus:-

stomach:212.40

intestine:64.80

colon:432.50

liver/hepato:73.90

lung:73.30

bladder:125.60

kidney:93.60

pituitary:-

thyroid/parathyroid:-

adrenal gland:-

pancreas:17.80

breast:223

salivary:-

GeneChip

uterus:7.77

placenta:7.58

prostate:7.75

ovary:6.97

testis:6.88

heart:7.02

muscle:6.26

esophagus:7.28

stomach:7.86

intestine:7.82

colon:7.30

liver/hepato:5.31

lung:7.50

bladder:-

kidney:7.20

pituitary:5.34

thyroid/parathyroid:6.56

adrenal gland:5.25

pancreas:7.53

breast:7.50

salivary:8.44

CAGE

uterus:4.52

placenta:4.79

prostate:3.97

ovary:3.31

testis:3.98

heart:4.32

muscle:3.83

esophagus:4.07

stomach:-

intestine:4.97

colon:4.69

liver/hepato:2.74

lung:4.35

bladder:3.92

kidney:4.29

pituitary:2.49

thyroid/parathyroid:3.11

adrenal gland:-

pancreas:4.56

breast:4.66

salivary:4.95

RNA-seq

uterus:-

placenta:-

prostate:3.78

ovary:2.99

testis:3.41

heart:3.09

muscle:1.12

esophagus:-

stomach:-

intestine:-

colon:3.42

liver/hepato:1.20

lung:2.90

bladder:-

kidney:2.00

pituitary:-

thyroid/parathyroid:3.95

adrenal gland:4.32

pancreas:-

breast:4.90

salivary:-

IDs

Refseq ID	NM_000210
Gene ID	3655
Unigene ID	Hs.133397
Probe set ID	201656_at [HG-U133_Plus_2]
Ensembl ID	ENSG00000091409
GTEx ID	ENSG00000091409

Orthologous Gene

Mouse[1]	NM_008397
Rat[1]	NM_008397

Chromosomal Region

2q31.1 [173,292,082 - 173,371,181]

Search genes near this gene
- Between -5kb and +5kb
- Between -10kb and +10kb

Gene Family (Interpro ID)

IPR013517	FG-GAP
IPR013519	Integrin alpha beta-propellor

GO:0007596	blood coagulation
GO:0007155	cell adhesion
GO:0034329	cell junction assembly
GO:0007044	cell-substrate junction assembly
GO:0030198	extracellular matrix organization
GO:0031581	hemidesmosome assembly
GO:0007229	integrin-mediated signaling pathway
GO:0050900	leukocyte migration
GO:0043065	positive regulation of apoptosis
GO:0042327	positive regulation of phosphorylation
GO:0045944	positive regulation of transcription from RNA polymerase II promoter

GO:0008305	integrin complex
GO:0005886	plasma membrane

GO:0046872	metal ion binding
GO:0005515	protein binding

integrin, alpha 6

Synonym

Expression Pattern

Choropleth map on BodyParts3D

Classification in 40 Organs

Gene Information

IDs

Orthologous Gene

Chromosomal Region

Gene Family (Interpro ID)

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

Cellular Component

Molecular Function