synaptotagmin XVII

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Synonym

SYT17, synaptotagmin XVII

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:40.30 cerebellum:12.60 brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:30.70 spine:- retina:- eye:29.40 artery/aorta:- vein:- lymphnode:30.30 peripheral blood:- spleen:- thymus:- bone marrow:19.70 adipose:- bone:- skin:4.80
GeneChip cerebrum:7.10 cerebellum:5.60 brain stem:7.25 corpus callosum/glia:6.92 pineal gland:- peripheral nerve:6.05 spine:6.68 retina:- eye:- artery/aorta:5.65 vein:5.47 lymphnode:5.85 peripheral blood:- spleen:5.64 thymus:4.95 bone marrow:5.58 adipose:6.15 bone:- skin:5.93
CAGE cerebrum:2.15 cerebellum:- brain stem:1.71 corpus callosum/glia:2.03 pineal gland:0.83 peripheral nerve:- spine:1.88 retina:- eye:- artery/aorta:1.10 vein:0.79 lymphnode:0.41 peripheral blood:- spleen:0.17 thymus:0.18 bone marrow:- adipose:0.36 bone:- skin:-
RNA-seq cerebrum:2.25 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:0.62 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:0.15 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:9.10 placenta:10.90 prostate:- ovary:- testis:- heart:25.50 muscle:20.10 esophagus:- stomach:21.20 intestine:- colon:17     liver/hepato:-        lung:14.70    bladder:- kidney:20.80 pituitary:232 thyroid/parathyroid:- adrenal gland:- pancreas:26.70 breast:37.20 salivary:-
GeneChip uterus:5.78 placenta:5.64 prostate:7.25 ovary:5.74 testis:5.25 heart:5.58 muscle:5.43 esophagus:5.93 stomach:6.14 intestine:5.64 colon:5.98 liver/hepato:7.21 lung:6.76 bladder:- kidney:6.46 pituitary:7.82 thyroid/parathyroid:6.87 adrenal gland:5.73 pancreas:5.52 breast:6.29 salivary:5.30
CAGE uterus:0.87 placenta:1.55 prostate:1.59 ovary:0.42 testis:0.54 heart:0.54 muscle:0.05 esophagus:0.97 stomach:- intestine:0.53 colon:1.51     liver/hepato:1.97    lung:1.85 bladder:0.64 kidney:1.32 pituitary:2.53 thyroid/parathyroid:1.68 adrenal gland:- pancreas:1.21 breast:0.90 salivary:0.36
RNA-seq uterus:- placenta:- prostate:1.03 ovary:0.36 testis:0.78 heart:0.05 muscle:0.07 esophagus:- stomach:- intestine:- colon:0.28     liver/hepato:2.36        lung:1.56    bladder:- kidney:1.46 pituitary:- thyroid/parathyroid:1.71 adrenal gland:0.54 pancreas:- breast:1.08 salivary:-

Gene Information

IDs

Refseq ID NM_016524
Gene ID 51760
Unigene ID Hs.258326
Probe set ID 205613_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000103528
GTEx ID ENSG00000103528

Orthologous Gene

Mouse[2]  NM_138649
Rat [0]  

Chromosomal Region

16p12.3  [19,179,571  -  19,279,652]

Gene Family (Interpro ID)

IPR000008  C2 calcium-dependent membrane targeting
IPR008973  C2 calcium/lipid-binding domain, CaLB
IPR018029  C2 membrane targeting protein

Link to Pubmed  (Pubmed ID)

10493829
12107410
12477932
16189514
16672768
16713569
16730941
20379614
21832049
21876473

Gene Ontology  (GO ID)

Cellular Component

GO:0016020  membrane
GO:0008021  synaptic vesicle
GO:0005802  trans-Golgi network

Molecular Function

GO:0005215  transporter activity