chromosome 9 open reading frame 6

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Synonym

CG-8, FLJ20457, chromosome 9 open reading frame 6, C9orf6

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:17.80 cerebellum:- brain stem:- corpus callosum/glia:58.30 pineal gland:- peripheral nerve:- spine:- retina:- eye:23.50 artery/aorta:- vein:- lymphnode:10.10 peripheral blood:- spleen:18.90 thymus:- bone marrow:- adipose:- bone:12.80 skin:14.40
GeneChip cerebrum:6.57 cerebellum:5.69 brain stem:6.68 corpus callosum/glia:6.36 pineal gland:- peripheral nerve:6.20 spine:6.55 retina:- eye:- artery/aorta:6.01 vein:6.37 lymphnode:6.07 peripheral blood:- spleen:5.87 thymus:6.37 bone marrow:6.17 adipose:6.50 bone:- skin:6.55
CAGE cerebrum:2.77 cerebellum:- brain stem:2.65 corpus callosum/glia:2.46 pineal gland:2.19 peripheral nerve:- spine:2.83 retina:- eye:- artery/aorta:2.12 vein:2.03 lymphnode:2.15 peripheral blood:- spleen:1.71 thymus:1.94 bone marrow:- adipose:2.15 bone:- skin:-
RNA-seq cerebrum:2.81 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:2.43 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:2.74 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:45.60 placenta:32.80 prostate:11.30 ovary:37.30 testis:60.60 heart:63.90 muscle:- esophagus:- stomach:- intestine:32.40 colon:33.90     liver/hepato:-        lung:24.40    bladder:- kidney:31.20 pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:18.60 salivary:-
GeneChip uterus:6.40 placenta:6.67 prostate:6.58 ovary:6.54 testis:6.80 heart:6.74 muscle:6.64 esophagus:6.58 stomach:6.52 intestine:6.42 colon:6.38 liver/hepato:6.34 lung:6.27 bladder:- kidney:6.21 pituitary:6.73 thyroid/parathyroid:6.37 adrenal gland:6.34 pancreas:6.93 breast:6.35 salivary:6.80
CAGE uterus:2.43 placenta:2.21 prostate:2.44 ovary:2.20 testis:2.76 heart:2.23 muscle:1.98 esophagus:2.29 stomach:- intestine:2.60 colon:1.96     liver/hepato:2.17    lung:2.52 bladder:2.25 kidney:2.54 pituitary:3.30 thyroid/parathyroid:2.86 adrenal gland:- pancreas:1.98 breast:2.79 salivary:2.50
RNA-seq uterus:- placenta:- prostate:3.57 ovary:3.33 testis:3.87 heart:2.81 muscle:2.67 esophagus:- stomach:- intestine:- colon:3.43     liver/hepato:2.63        lung:2.61    bladder:- kidney:3.30 pituitary:- thyroid/parathyroid:3.44 adrenal gland:2.92 pancreas:- breast:3.26 salivary:-

Gene Information

IDs

Refseq ID NM_017832
Gene ID 54942
Unigene ID Hs.29276
Probe set ID 218998_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000119328
GTEx ID ENSG00000119328

Orthologous Gene

Mouse[1]  NM_001081420
Rat[1]  NM_001081420

Chromosomal Region

9q31.3  [111,696,461  -  111,713,024]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

12477932
15607035
17207965
21906983
24250222

Gene Ontology  (GO ID)

Biological Process

GO:0006546  glycine catabolic process

Cellular Component

GO:0005960  glycine cleavage complex