ubiquitin specific peptidase 40

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Synonym

ubiquitin specific protease 40, ubiquitin specific peptidase 40, Ubiquitin-specific-processing protease 40, FLJ10785, FLJ42100, USP40, Ubiquitin thioesterase 40, Ubiquitin carboxyl-terminal hydrolase 40, Deubiquitinating enzyme 40

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:16.60 cerebellum:12.60 brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:30.70 spine:- retina:118.60 eye:82.30 artery/aorta:- vein:- lymphnode:50.60 peripheral blood:- spleen:113.40 thymus:12.90 bone marrow:- adipose:40.30 bone:25.60 skin:24
GeneChip nodata
CAGE cerebrum:3.00 cerebellum:- brain stem:3.47 corpus callosum/glia:3.78 pineal gland:3.15 peripheral nerve:- spine:3.74 retina:- eye:- artery/aorta:3.15 vein:2.80 lymphnode:2.89 peripheral blood:- spleen:2.69 thymus:2.73 bone marrow:- adipose:3.07 bone:- skin:-
RNA-seq cerebrum:1.72 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:1.41 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:1.97 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:45.60 placenta:32.80 prostate:33.80 ovary:- testis:34.60 heart:12.80 muscle:20.10 esophagus:- stomach:42.50 intestine:32.40 colon:59.40     liver/hepato:31.70        lung:44    bladder:- kidney:20.80 pituitary:- thyroid/parathyroid:- adrenal gland:50.80 pancreas:17.80 breast:18.60 salivary:-
GeneChip nodata
CAGE uterus:3.21 placenta:3.21 prostate:2.93 ovary:3.11 testis:3.53 heart:2.69 muscle:2.85 esophagus:2.80 stomach:- intestine:3.22 colon:2.99     liver/hepato:3.10    lung:2.92 bladder:2.80 kidney:3.21 pituitary:3.47 thyroid/parathyroid:3.07 adrenal gland:- pancreas:3.20 breast:2.47 salivary:3.27
RNA-seq uterus:- placenta:- prostate:2.57 ovary:2.86 testis:2.73 heart:1.70 muscle:0.97 esophagus:- stomach:- intestine:- colon:1.35     liver/hepato:2.50        lung:1.36    bladder:- kidney:2.59 pituitary:- thyroid/parathyroid:3.43 adrenal gland:2.46 pancreas:- breast:2.24 salivary:-

Gene Information

IDs

Refseq ID NM_018218
Gene ID 55230
Unigene ID Hs.96513
Probe set ID -
Ensembl ID ENSG00000085982
GTEx ID ENSG00000085982

Orthologous Gene

Mouse[1]  NM_001033291, NM_001198573
Rat[2]  NM_001134885, NM_001198573

Chromosomal Region

2q37.1  [234,384,166  -  234,475,428]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

11673459
12045112
12477932
12838346
14702039
14715245
15489334
15815621
16917932
18029348
20302855
21139048
21646302
22412388
22923019

Gene Ontology  (GO ID)

Biological Process

GO:0006511  ubiquitin-dependent protein catabolic process

Molecular Function

GO:0008234  cysteine-type peptidase activity
GO:0004221  ubiquitin thiolesterase activity