achaete-scute complex homolog 3 (Drosophila)

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Synonym

achaete-scute complex (Drosophila) homolog-like 3, SGN1, HASH3, ASCL3, bHLH transcriptional regulator Sgn-1, Achaete-scute homolog 3

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:- cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
GeneChip cerebrum:5 cerebellum:5.06 brain stem:5 corpus callosum/glia:4.94 pineal gland:- peripheral nerve:4.94 spine:5.02 retina:- eye:- artery/aorta:4.90 vein:5.09 lymphnode:4.99 peripheral blood:- spleen:4.82 thymus:4.75 bone marrow:5.11 adipose:5.12 bone:- skin:5.07
CAGE nodata
RNA-seq cerebrum:0 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:0 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:0.05 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:- prostate:- ovary:- testis:- heart:- muscle:- esophagus:- stomach:- intestine:- colon:-     liver/hepato:-        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-
GeneChip uterus:4.77 placenta:5.07 prostate:4.61 ovary:4.66 testis:4.90 heart:5.09 muscle:5.08 esophagus:5.08 stomach:4.93 intestine:4.91 colon:5.26 liver/hepato:5.20 lung:4.74 bladder:- kidney:5.14 pituitary:5.17 thyroid/parathyroid:4.85 adrenal gland:4.94 pancreas:5.17 breast:4.78 salivary:5.71
CAGE nodata
RNA-seq uterus:- placenta:- prostate:0 ovary:0.18 testis:0.28 heart:0 muscle:0 esophagus:- stomach:- intestine:- colon:0     liver/hepato:0        lung:0    bladder:- kidney:0 pituitary:- thyroid/parathyroid:0 adrenal gland:0.27 pancreas:- breast:0 salivary:-

Gene Information

IDs

Refseq ID NM_020646
Gene ID 56676
Unigene ID Hs.501852
Probe set ID 221161_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000176009
GTEx ID ENSG00000176009

Orthologous Gene

Mouse[1]  NM_020051
Rat[1]  NM_020051

Chromosomal Region

11p15.4  [8,959,119  -  8,964,580]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

11528127
11784080
15475265
18029348
20211142
21832049

Gene Ontology  (GO ID)

Biological Process

GO:0006357  regulation of transcription from RNA polymerase II promoter
GO:0006351  transcription, DNA-dependent

Cellular Component

GO:0043231  intracellular membrane-bounded organelle
GO:0005730  nucleolus
GO:0005634  nucleus
GO:0005667  transcription factor complex

Molecular Function

GO:0003677  DNA binding
GO:0046983  protein dimerization activity