retinitis pigmentosa GTPase regulator interacting protein 1

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Synonym

RPGRIP1, DKFZp686P0897, RPGRIP1d, LCA6, CORD9, RPGR-interacting protein 1, RGI1, RPGRIP, RGRIP

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:3.60 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:237.30 eye:11.80 artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
GeneChip cerebrum:5.07 cerebellum:4.98 brain stem:5.13 corpus callosum/glia:5 pineal gland:- peripheral nerve:4.95 spine:4.92 retina:- eye:- artery/aorta:5.13 vein:5.11 lymphnode:5.06 peripheral blood:- spleen:4.98 thymus:4.76 bone marrow:5.28 adipose:5.13 bone:- skin:5.32
CAGE cerebrum:0.18 cerebellum:- brain stem:0.35 corpus callosum/glia:0.66 pineal gland:0.36 peripheral nerve:- spine:0.68 retina:- eye:- artery/aorta:0.18 vein:0.18 lymphnode:0.15 peripheral blood:- spleen:0.39 thymus:0.12 bone marrow:- adipose:0.26 bone:- skin:-
RNA-seq cerebrum:0.04 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:0.08 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:0.18 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:18.20 placenta:- prostate:22.50 ovary:- testis:341.80 heart:- muscle:- esophagus:- stomach:- intestine:- colon:-     liver/hepato:-        lung:4.90    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:8.90 breast:- salivary:-
GeneChip uterus:4.91 placenta:5.14 prostate:4.87 ovary:4.80 testis:8.28 heart:5.10 muscle:5.34 esophagus:4.82 stomach:4.90 intestine:5.17 colon:5.10 liver/hepato:5.12 lung:4.96 bladder:- kidney:5.12 pituitary:4.97 thyroid/parathyroid:4.83 adrenal gland:5.01 pancreas:5.66 breast:4.80 salivary:5.12
CAGE uterus:0.33 placenta:0.85 prostate:0.21 ovary:0.14 testis:2.77 heart:0.23 muscle:0.09 esophagus:0.26 stomach:- intestine:0.38 colon:0     liver/hepato:0.36    lung:0.63 bladder:0.26 kidney:0.21 pituitary:0 thyroid/parathyroid:0 adrenal gland:- pancreas:0 breast:0 salivary:0.36
RNA-seq uterus:- placenta:- prostate:0.08 ovary:0.09 testis:3.44 heart:0.12 muscle:0 esophagus:- stomach:- intestine:- colon:0.04     liver/hepato:0.16        lung:0.05    bladder:- kidney:0.02 pituitary:- thyroid/parathyroid:0.24 adrenal gland:0.25 pancreas:- breast:0.09 salivary:-

Gene Information

IDs

Refseq ID NM_020366
Gene ID 57096
Unigene ID Hs.126035
Probe set ID 206608_s_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000092200
GTEx ID ENSG00000092200

Orthologous Gene

Mouse[6]  NM_001168515, NM_023879
Rat[6]  NM_001168515, NM_023879

Chromosomal Region

14q11.2  [21,756,098  -  21,819,460]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

10958647
10958648
11104772
11283794
11528500
12140192
12477932
12920076
15489334
15772089
15800011
15914599
16272259
16339905
17082780
17306875
17558407
20090203
20301475
20801516
21224891
21685204
22183349
22990118
23278760
23505306

Gene Ontology  (GO ID)

Biological Process

GO:0042462  eye photoreceptor cell development
GO:0050896  response to stimulus
GO:0060041  retina development in camera-type eye
GO:0007601  visual perception

Cellular Component

GO:0005930  axoneme
GO:0005929  cilium

Molecular Function

GO:0005515  protein binding