synovial sarcoma, X breakpoint 2

 jump to detail

Synonym

SSX2, Protein SSX2, MGC119055, HD21, SSX, HOM-MEL-40, MGC3884, Synovial sarcoma, X breakpoint 2, synovial sarcoma, X breakpoint 2, MGC15364

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:1.20 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
GeneChip cerebrum:5.62 cerebellum:5.42 brain stem:5.74 corpus callosum/glia:5.56 pineal gland:- peripheral nerve:5.69 spine:5.62 retina:- eye:- artery/aorta:5.54 vein:5.74 lymphnode:5.33 peripheral blood:- spleen:5.46 thymus:5.37 bone marrow:5.74 adipose:5.67 bone:- skin:5.65
CAGE nodata
RNA-seq cerebrum:0 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:0 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:0.00 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:- prostate:- ovary:- testis:13 heart:- muscle:- esophagus:- stomach:- intestine:- colon:-     liver/hepato:-        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-
GeneChip uterus:5.29 placenta:5.55 prostate:5.27 ovary:5.47 testis:8.87 heart:5.79 muscle:5.82 esophagus:5.29 stomach:5.47 intestine:5.66 colon:5.91 liver/hepato:5.58 lung:5.24 bladder:- kidney:5.61 pituitary:5.62 thyroid/parathyroid:5.50 adrenal gland:5.47 pancreas:5.60 breast:5.25 salivary:5.74
CAGE nodata
RNA-seq uterus:- placenta:- prostate:0 ovary:0 testis:0.07 heart:0 muscle:0 esophagus:- stomach:- intestine:- colon:0     liver/hepato:0        lung:0    bladder:- kidney:0 pituitary:- thyroid/parathyroid:0.00 adrenal gland:0 pancreas:- breast:0.00 salivary:-

Gene Information

IDs

Refseq ID NM_003147
Gene ID 6757
Unigene ID Hs.289105
Probe set ID 210497_x_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000241476
GTEx ID ENSG00000241476

Orthologous Gene

Mouse[11]  NM_001001450, NM_001134226, NM_199063, NM_199066, NM_199064, NM_199319, NM_001081564, NM_198898, NM_001205108, NM_001081565, NM_001126491, NM_026492
Rat[11]  NM_001001450, NM_001134226, NM_199063, NM_199066, NM_199064, NM_199319, NM_001081564, NM_198898, NM_001205108, NM_001081565, NM_001126491, NM_026492

Chromosomal Region

Xp11.22  [52,725,946  -  52,736,239]
Xp11.22  [52,780,318  -  52,790,617]

Gene Family (Interpro ID)

IPR001909  Krueppel-associated box
IPR003655  Krueppel-associated box-related

Link to Pubmed  (Pubmed ID)

7495284
7539744
7655467
7951320
8152806
8840996
9285793
10749136
11076863
11256614
11274403
11368913
12007189
12037676
12216073
12477932
15489334
15489336
15596411
15735574
15772651
16152617
16381901
16546222
19337376
21996728
22007079
22344619
22393780
22439931
22550415
22594313
22797074
22862905
22976541
23109999
23313505
23619976
23623359
24130893

Gene Ontology  (GO ID)

-