tRNA splicing endonuclease 34 homolog (S. cerevisiae)

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Synonym

LENG5, leukocyte receptor cluster (LRC) member 5, tRNA-splicing endonuclease subunit Sen34, SEN34, SEN34L, HsSen34, tRNA-intron endonuclease Sen34, Leukocyte receptor cluster member 5, TSEN34

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST nodata
GeneChip cerebrum:6.61 cerebellum:6.14 brain stem:6.55 corpus callosum/glia:6.88 pineal gland:- peripheral nerve:7.01 spine:7.04 retina:- eye:- artery/aorta:7.54 vein:7.37 lymphnode:7.28 peripheral blood:- spleen:7.66 thymus:7.10 bone marrow:7.28 adipose:7.29 bone:- skin:7.65
CAGE cerebrum:1.96 cerebellum:- brain stem:1.86 corpus callosum/glia:2.20 pineal gland:2.53 peripheral nerve:- spine:2.15 retina:- eye:- artery/aorta:2.91 vein:2.60 lymphnode:2.69 peripheral blood:- spleen:2.76 thymus:2.31 bone marrow:- adipose:2.41 bone:- skin:-
RNA-seq cerebrum:0.51 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:0.88 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:2.12 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST nodata
GeneChip uterus:7.78 placenta:7.25 prostate:8.25 ovary:7.88 testis:8.48 heart:6.92 muscle:6.58 esophagus:7.76 stomach:7.32 intestine:7.26 colon:7.48 liver/hepato:7.23 lung:7.53 bladder:- kidney:7.78 pituitary:7.45 thyroid/parathyroid:8.09 adrenal gland:7.76 pancreas:7.34 breast:7.95 salivary:7.65
CAGE uterus:2.86 placenta:2.90 prostate:3.04 ovary:3.34 testis:3.33 heart:2.55 muscle:2.15 esophagus:2.88 stomach:- intestine:2.02 colon:2.93     liver/hepato:2.71    lung:2.61 bladder:2.83 kidney:2.60 pituitary:2.12 thyroid/parathyroid:3.13 adrenal gland:- pancreas:2.98 breast:1.92 salivary:2.85
RNA-seq uterus:- placenta:- prostate:1.93 ovary:2.16 testis:1.94 heart:0.52 muscle:2.16 esophagus:- stomach:- intestine:- colon:1.65     liver/hepato:1.49        lung:0.66    bladder:- kidney:2.11 pituitary:- thyroid/parathyroid:2.71 adrenal gland:1.98 pancreas:- breast:2.09 salivary:-

Gene Information

IDs

Refseq ID NM_024075
Gene ID 79042
Unigene ID -
Probe set ID 218132_s_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000170892
GTEx ID ENSG00000170892

Orthologous Gene

Mouse[3]  NM_001164204, NM_001164205, NM_024168
Rat[1]  NM_001006968, NM_001164205, NM_024168

Chromosomal Region

19q13.42  [54,693,789  -  54,697,585]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

8125298
8889548
10941842
12477932
14702039
15109492
15146197
15231747
15489334
18711368
20301773
20360068
21139048
21906983
21963094
21987572
22863883
23251661
23562994
24250222

Gene Ontology  (GO ID)

Biological Process

GO:0006397  mRNA processing
GO:0000379  tRNA-type intron splice site recognition and cleavage

Cellular Component

GO:0005730  nucleolus
GO:0000214  tRNA-intron endonuclease complex

Molecular Function

GO:0003676  nucleic acid binding
GO:0000213  tRNA-intron endonuclease activity