SET domain containing 6

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Synonym

SETD6, SET domain containing 6, FLJ21148

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST nodata
GeneChip nodata
CAGE cerebrum:2.13 cerebellum:- brain stem:2.16 corpus callosum/glia:1.92 pineal gland:1.97 peripheral nerve:- spine:1.89 retina:- eye:- artery/aorta:2.22 vein:1.89 lymphnode:1.74 peripheral blood:- spleen:1.80 thymus:1.61 bone marrow:- adipose:1.93 bone:- skin:-
RNA-seq cerebrum:0.30 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:0.33 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:0.61 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST nodata
GeneChip nodata
CAGE uterus:2.10 placenta:1.91 prostate:2.37 ovary:1.98 testis:2.17 heart:2.18 muscle:2.52 esophagus:1.98 stomach:- intestine:1.64 colon:2.04     liver/hepato:2.14    lung:2.02 bladder:1.76 kidney:2.23 pituitary:2.42 thyroid/parathyroid:2.36 adrenal gland:- pancreas:2.76 breast:2.02 salivary:2.22
RNA-seq uterus:- placenta:- prostate:1.15 ovary:0.00 testis:0.04 heart:0.97 muscle:0.11 esophagus:- stomach:- intestine:- colon:0.79     liver/hepato:0.14        lung:0.16    bladder:- kidney:0.92 pituitary:- thyroid/parathyroid:0.82 adrenal gland:0.86 pancreas:- breast:1.10 salivary:-

Gene Information

IDs

Refseq ID NM_001160305
Gene ID 79918
Unigene ID -
Probe set ID -
Ensembl ID ENSG00000103037
GTEx ID ENSG00000103037

Orthologous Gene

Mouse[2]  NM_001035123
Rat[1]  NM_001106167

Chromosomal Region

16q21  [58,549,383  -  58,554,431]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

12477932
14702039
15342556
15489334
16344560
19416867
21131967
21139048
21515635
21906983
21963094
23324626

Gene Ontology  (GO ID)

Biological Process

GO:0032088  negative regulation of NF-kappaB transcription factor activity
GO:0018026  peptidyl-lysine monomethylation
GO:0050727  regulation of inflammatory response

Cellular Component

GO:0005634  nucleus

Molecular Function

GO:0051059  NF-kappaB binding
GO:0005515  protein binding
GO:0016279  protein-lysine N-methyltransferase activity