synaptopodin 2-like

 jump to detail

Synonym

synaptopodin 2-like, SYNPO2L, FLJ12921, Synaptopodin 2-like protein

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:- cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
GeneChip cerebrum:2.94 cerebellum:2.80 brain stem:3 corpus callosum/glia:2.77 pineal gland:- peripheral nerve:2.76 spine:2.85 retina:- eye:- artery/aorta:3.80 vein:5.56 lymphnode:3 peripheral blood:- spleen:2.73 thymus:2.89 bone marrow:2.85 adipose:2.85 bone:- skin:3.72
CAGE cerebrum:0.12 cerebellum:- brain stem:0.19 corpus callosum/glia:0.43 pineal gland:0 peripheral nerve:- spine:0.42 retina:- eye:- artery/aorta:0.18 vein:1.65 lymphnode:0.95 peripheral blood:- spleen:0.09 thymus:0 bone marrow:- adipose:2.20 bone:- skin:-
RNA-seq cerebrum:0.17 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:0.12 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:0.05 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:- prostate:- ovary:- testis:- heart:- muscle:- esophagus:- stomach:- intestine:- colon:-     liver/hepato:-        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-
GeneChip uterus:2.81 placenta:3.41 prostate:2.96 ovary:2.90 testis:2.98 heart:7.83 muscle:9.19 esophagus:6.41 stomach:2.87 intestine:3.95 colon:2.93 liver/hepato:2.92 lung:3.22 bladder:- kidney:2.80 pituitary:2.96 thyroid/parathyroid:2.82 adrenal gland:3.42 pancreas:2.99 breast:3.31 salivary:2.89
CAGE uterus:0.04 placenta:0 prostate:0.15 ovary:0.20 testis:0.30 heart:3.99 muscle:4.85 esophagus:1.54 stomach:- intestine:0.07 colon:0     liver/hepato:0.14    lung:0.18 bladder:0.09 kidney:0 pituitary:0 thyroid/parathyroid:1.32 adrenal gland:- pancreas:0 breast:0 salivary:0
RNA-seq uterus:- placenta:- prostate:0.06 ovary:0.13 testis:1.16 heart:4.57 muscle:5.38 esophagus:- stomach:- intestine:- colon:0.00     liver/hepato:0.00        lung:0.08    bladder:- kidney:0.02 pituitary:- thyroid/parathyroid:3.36 adrenal gland:0.33 pancreas:- breast:1.35 salivary:-

Gene Information

IDs

Refseq ID NM_001114133
Gene ID 79933
Unigene ID Hs.645273
Probe set ID 219804_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000166317
GTEx ID ENSG00000166317

Orthologous Gene

Mouse[1]  NM_175132
Rat[1]  NM_175132

Chromosomal Region

10q22.2  [75,404,639  -  75,415,830]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

8889549
12477932
14702039
15164054
16344560
16385451
20467438
22544366

Gene Ontology  (GO ID)

Cellular Component

GO:0005856  cytoskeleton
GO:0005634  nucleus
GO:0030018  Z disc

Molecular Function

GO:0003779  actin binding