Zic family member 5 (odd-paired homolog, Drosophila)

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Synonym

Zinc finger protein of the cerebellum 5, ZIC5, Zinc finger protein ZIC 5

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:- cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:153.40 spine:- retina:118.60 eye:11.80 artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
GeneChip nodata
CAGE cerebrum:1.75 cerebellum:- brain stem:1.26 corpus callosum/glia:2.15 pineal gland:1.02 peripheral nerve:- spine:0.94 retina:- eye:- artery/aorta:0.59 vein:0 lymphnode:0.03 peripheral blood:- spleen:0 thymus:0 bone marrow:- adipose:0 bone:- skin:-
RNA-seq cerebrum:0.72 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:0 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:0 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:- prostate:- ovary:- testis:13 heart:- muscle:- esophagus:- stomach:- intestine:- colon:-     liver/hepato:-        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-
GeneChip nodata
CAGE uterus:0 placenta:0 prostate:0 ovary:0 testis:1.10 heart:0 muscle:0 esophagus:0 stomach:- intestine:0 colon:0     liver/hepato:0    lung:0 bladder:0.09 kidney:0.08 pituitary:0 thyroid/parathyroid:0 adrenal gland:- pancreas:0 breast:0 salivary:0
RNA-seq uterus:- placenta:- prostate:0.03 ovary:0.01 testis:1.41 heart:0 muscle:0 esophagus:- stomach:- intestine:- colon:0     liver/hepato:0        lung:0    bladder:- kidney:0 pituitary:- thyroid/parathyroid:0.01 adrenal gland:0.04 pancreas:- breast:0.02 salivary:-

Gene Information

IDs

Refseq ID NM_033132
Gene ID 85416
Unigene ID Hs.508570
Probe set ID -
Ensembl ID ENSG00000139800
GTEx ID ENSG00000139800

Orthologous Gene

Mouse[2]  NM_022987
Rat[1]  NM_001108391

Chromosomal Region

13q32.3  [100,615,275  -  100,624,163]

Gene Family (Interpro ID)

IPR015880  Zinc finger, C2H2-like
IPR007087  Zinc finger, C2H2-type

Link to Pubmed  (Pubmed ID)

11044622
15146197
15465018
20199689
20467438
20683983

Gene Ontology  (GO ID)

Biological Process

GO:0030154  cell differentiation
GO:0030900  forebrain development
GO:0001843  neural tube closure

Cellular Component

GO:0005634  nucleus

Molecular Function

GO:0003677  DNA binding
GO:0046872  metal ion binding
GO:0003700  transcription factor activity