PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)

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Synonym

FLJ10210, Pre-mRNA-splicing factor 18, PRP18 homolog, PRPF18, PRP18, HPRP18, hPrp18, hPRP18

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST nodata
GeneChip cerebrum:4.67 cerebellum:4.88 brain stem:4.78 corpus callosum/glia:4.68 pineal gland:- peripheral nerve:5.08 spine:4.73 retina:- eye:- artery/aorta:4.96 vein:5.25 lymphnode:5.05 peripheral blood:- spleen:4.97 thymus:6.49 bone marrow:5.81 adipose:5.38 bone:- skin:5.50
CAGE cerebrum:3.86 cerebellum:- brain stem:3.85 corpus callosum/glia:3.66 pineal gland:4.35 peripheral nerve:- spine:4.10 retina:- eye:- artery/aorta:3.31 vein:3.41 lymphnode:3.45 peripheral blood:- spleen:3.68 thymus:3.91 bone marrow:- adipose:3.57 bone:- skin:-
RNA-seq cerebrum:3.11 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:3.11 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:3.49 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST nodata
GeneChip uterus:5.48 placenta:5.67 prostate:5.81 ovary:5.44 testis:6.23 heart:5.14 muscle:5.58 esophagus:5.33 stomach:4.86 intestine:5.38 colon:4.44 liver/hepato:4.51 lung:5.15 bladder:- kidney:4.75 pituitary:5.01 thyroid/parathyroid:5.31 adrenal gland:4.90 pancreas:5.14 breast:5.30 salivary:4.87
CAGE uterus:3.90 placenta:3.77 prostate:3.66 ovary:3.65 testis:3.61 heart:3.68 muscle:4.12 esophagus:3.49 stomach:- intestine:3.82 colon:3.44     liver/hepato:3.54    lung:3.58 bladder:3.60 kidney:3.89 pituitary:4.40 thyroid/parathyroid:3.70 adrenal gland:- pancreas:3.16 breast:3.45 salivary:3.67
RNA-seq uterus:- placenta:- prostate:3.86 ovary:3.66 testis:4.50 heart:2.79 muscle:3.03 esophagus:- stomach:- intestine:- colon:3.82     liver/hepato:3.13        lung:3.00    bladder:- kidney:3.81 pituitary:- thyroid/parathyroid:4.10 adrenal gland:3.62 pancreas:- breast:3.68 salivary:-

Gene Information

IDs

Refseq ID NM_003675
Gene ID 8559
Unigene ID -
Probe set ID 221547_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000165630
GTEx ID ENSG00000165630

Orthologous Gene

Mouse[1]  NM_026045
Rat[1]  NM_138523

Chromosomal Region

10p13  [13,628,927  -  13,672,868]

Gene Family (Interpro ID)

IPR014906  Pre-mRNA processing factor 4 (PRP4) like
IPR003648  Splicing factor motif

Link to Pubmed  (Pubmed ID)

8436300
9000057
11823439
12477932
15489334
16344560
16385451
19471022
20379614
21890473
22213562
22939629
24025145
24816145

Gene Ontology  (GO ID)

Biological Process

GO:0006397  mRNA processing
GO:0008380  RNA splicing

Cellular Component

GO:0016607  nuclear speck
GO:0005634  nucleus
GO:0005681  spliceosomal complex

Molecular Function

GO:0019870  potassium channel inhibitor activity