vacuolar protein sorting 26 homolog A (S. pombe)

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Synonym

Vacuolar protein sorting-associated protein 26A, Hbeta58, VPS26, vacuolar protein sorting 26 (yeast homolog), HB58, vacuolar protein sorting 26 (yeast), FLJ12930, Vesicle protein sorting 26A, vacuolar protein sorting 26 homolog A (yeast), VPS26A, hVPS26

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:135.10 cerebellum:50.40 brain stem:- corpus callosum/glia:87.50 pineal gland:148.30 peripheral nerve:153.40 spine:112.30 retina:- eye:64.60 artery/aorta:329.70 vein:133.30 lymphnode:91 peripheral blood:109.30 spleen:75.60 thymus:51.50 bone marrow:- adipose:- bone:89.60 skin:81.60
GeneChip cerebrum:8.11 cerebellum:8.66 brain stem:8.35 corpus callosum/glia:8.07 pineal gland:- peripheral nerve:8.55 spine:8.17 retina:- eye:- artery/aorta:8.15 vein:8.27 lymphnode:7.83 peripheral blood:- spleen:7.85 thymus:8.20 bone marrow:7.76 adipose:8.44 bone:- skin:8.59
CAGE cerebrum:4.06 cerebellum:- brain stem:3.94 corpus callosum/glia:3.32 pineal gland:4.23 peripheral nerve:- spine:4.29 retina:- eye:- artery/aorta:3.57 vein:3.35 lymphnode:3.35 peripheral blood:- spleen:3.75 thymus:3.49 bone marrow:- adipose:4.01 bone:- skin:-
RNA-seq cerebrum:4.77 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:4.47 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:4.86 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:45.60 placenta:83.80 prostate:112.60 ovary:149.10 testis:173.10 heart:51.10 muscle:60.30 esophagus:- stomach:85 intestine:129.60 colon:25.40     liver/hepato:52.80        lung:83.10    bladder:251.20 kidney:104 pituitary:- thyroid/parathyroid:- adrenal gland:152.40 pancreas:62.20 breast:55.80 salivary:-
GeneChip uterus:8.44 placenta:8.27 prostate:8.66 ovary:8.48 testis:9.10 heart:7.88 muscle:8.18 esophagus:8.45 stomach:7.90 intestine:7.94 colon:7.62 liver/hepato:7.26 lung:8.38 bladder:- kidney:7.89 pituitary:7.27 thyroid/parathyroid:8.12 adrenal gland:7.99 pancreas:7.16 breast:8.65 salivary:7.98
CAGE uterus:3.63 placenta:4.07 prostate:3.82 ovary:3.70 testis:4.02 heart:3.87 muscle:3.88 esophagus:4.09 stomach:- intestine:3.87 colon:3.15     liver/hepato:3.64    lung:3.65 bladder:4.00 kidney:4.05 pituitary:3.75 thyroid/parathyroid:3.63 adrenal gland:- pancreas:2.98 breast:3.49 salivary:3.67
RNA-seq uterus:- placenta:- prostate:5.27 ovary:5.12 testis:5.49 heart:4.28 muscle:4.28 esophagus:- stomach:- intestine:- colon:5.06     liver/hepato:4.05        lung:4.91    bladder:- kidney:5.08 pituitary:- thyroid/parathyroid:5.11 adrenal gland:4.49 pancreas:- breast:5.25 salivary:-

Gene Information

IDs

Refseq ID NM_004896
Gene ID 9559
Unigene ID Hs.499925
Probe set ID 201807_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000122958
GTEx ID ENSG00000122958

Orthologous Gene

Mouse[4]  NM_001113355, NM_133672
Rat [0]  

Chromosomal Region

10q22.1  [70,883,268  -  70,932,617]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

1638986
9653160
11042152
11102511
11598206
12477932
14702039
15164054
15247922
15282546
15489334
16190980
16196087
16315276
16407403
16732284
16784798
17101778
18781797
19322201
19531583
19738201
20619655
20682791
21139048
21874001
21875946
21890473
21906983
21920005
21963094
22053931
22284051
22354992
22610502
22863883
22939629
23000965
23452853
23455922
23903356
24654937
24816145

Gene Ontology  (GO ID)

Biological Process

GO:0042147  retrograde transport, endosome to Golgi
GO:0007034  vacuolar transport

Cellular Component

GO:0005829  cytosol
GO:0005768  endosome
GO:0010008  endosome membrane
GO:0030904  retromer complex
GO:0031982  vesicle

Molecular Function

GO:0005515  protein binding
GO:0008565  protein transporter activity