ROD1 regulator of differentiation 1 (S. pombe)

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Synonym

regulator of differentiation (in S. pombe) 1, ROD1, Rod1, Regulator of differentiation 1, ROD1 regulator of differentiation 1 (S. pombe), DKFZp781I1117

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:24.90 cerebellum:12.60 brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:214.70 spine:561.50 retina:- eye:23.50 artery/aorta:149.90 vein:- lymphnode:202.20 peripheral blood:72.90 spleen:- thymus:180.40 bone marrow:98.40 adipose:40.30 bone:- skin:120
GeneChip cerebrum:3.18 cerebellum:3.17 brain stem:3.23 corpus callosum/glia:3.14 pineal gland:- peripheral nerve:3.28 spine:3.22 retina:- eye:- artery/aorta:3.37 vein:3.33 lymphnode:3.99 peripheral blood:- spleen:4.02 thymus:6.02 bone marrow:4.81 adipose:3.49 bone:- skin:3.94
CAGE cerebrum:3.34 cerebellum:- brain stem:3.17 corpus callosum/glia:3.27 pineal gland:4.18 peripheral nerve:- spine:4.01 retina:- eye:- artery/aorta:4.35 vein:4.64 lymphnode:5.04 peripheral blood:- spleen:4.56 thymus:4.94 bone marrow:- adipose:4.53 bone:- skin:-
RNA-seq cerebrum:1.28 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:2.30 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:3.37 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:91.10 placenta:43.70 prostate:45.10 ovary:37.30 testis:77.90 heart:12.80 muscle:20.10 esophagus:- stomach:212.40 intestine:32.40 colon:178.10     liver/hepato:116.10        lung:122.20    bladder:- kidney:104 pituitary:- thyroid/parathyroid:- adrenal gland:50.80 pancreas:160 breast:120.80 salivary:-
GeneChip uterus:3.69 placenta:4.54 prostate:3.86 ovary:3.79 testis:3.68 heart:3.49 muscle:3.40 esophagus:5.07 stomach:4.11 intestine:3.92 colon:4.15 liver/hepato:3.32 lung:3.61 bladder:- kidney:3.90 pituitary:3.42 thyroid/parathyroid:3.47 adrenal gland:3.31 pancreas:4.20 breast:3.85 salivary:3.75
CAGE uterus:4.32 placenta:4.56 prostate:4.12 ovary:4.00 testis:4.67 heart:4.03 muscle:3.36 esophagus:4.99 stomach:- intestine:4.78 colon:4.76     liver/hepato:3.82    lung:4.86 bladder:4.51 kidney:4.60 pituitary:4.15 thyroid/parathyroid:3.84 adrenal gland:- pancreas:4.23 breast:4.71 salivary:4.49
RNA-seq uterus:- placenta:- prostate:0.76 ovary:2.19 testis:3.14 heart:1.01 muscle:1.30 esophagus:- stomach:- intestine:- colon:1.43     liver/hepato:0.35        lung:3.06    bladder:- kidney:2.09 pituitary:- thyroid/parathyroid:1.31 adrenal gland:2.49 pancreas:- breast:1.04 salivary:-

Gene Information

IDs

Refseq ID NM_001163788
Gene ID 9991
Unigene ID Hs.269988
Probe set ID 214697_s_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000119314
GTEx ID ENSG00000119314

Orthologous Gene

Mouse[6]  NM_144904, NM_178164
Rat[1]  NM_031346, NM_178164

Chromosomal Region

9q32  [114,980,715  -  115,095,947]

Gene Family (Interpro ID)

IPR000504  RNA recognition motif, RNP-1

Link to Pubmed  (Pubmed ID)

10207106
12477932
14702039
15146197
15489334
18335065
19322201
19441079
19471022
20379614
20467438
21139048
21832049
21890473
21906983
21963094
21987572
22505724
22575643
22939629
23000965
23022380
23024754
24457600
24816145

Gene Ontology  (GO ID)

Biological Process

GO:0009653  anatomical structure morphogenesis
GO:0043249  erythrocyte maturation
GO:0006397  mRNA processing
GO:0033119  negative regulation of RNA splicing
GO:0045595  regulation of cell differentiation
GO:0008380  RNA splicing

Cellular Component

GO:0005634  nucleus

Molecular Function

GO:0000166  nucleotide binding
GO:0003723  RNA binding